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RNAshape abstraction maps structures to a tree-like domain of shapes, retaining adjacency and nesting of structural features, but disregarding helix lengths. Shape abstraction integrates well with dynamic programming algorithms, and hence it can be applied during structure prediction rather than afterwards. This avoids exponential explosion and can still give us a non-heuristic and complete account of properties of the molecule's folding space.

Type Size Name Uploaded Downloads Labels
conda 5.6 MB | linux-aarch64/rnashapes-3.4.0-pl5321h163da20_2.tar.bz2  3 months and 1 day ago 17 main
conda 5.7 MB | linux-64/rnashapes-3.4.0-pl5321h9948957_2.tar.bz2  3 months and 4 days ago 61 main
conda 6.5 MB | osx-64/rnashapes-3.4.0-pl5321hac4f329_1.tar.bz2  7 months and 18 days ago 423 main
conda 5.6 MB | linux-64/rnashapes-3.4.0-pl5321h4ac6f70_1.tar.bz2  7 months and 18 days ago 80 main
conda 5.6 MB | linux-aarch64/rnashapes-3.4.0-pl5321h78569d1_1.tar.bz2  7 months and 18 days ago 36 main
conda 6.5 MB | osx-64/rnashapes-3.4.0-pl5321hac4f329_0.tar.bz2  7 months and 19 days ago 36 main
conda 5.7 MB | linux-64/rnashapes-3.4.0-pl5321h4ac6f70_0.tar.bz2  7 months and 19 days ago 65 main
conda 5.7 MB | linux-64/rnashapes-3.3.2-pl5321h4ac6f70_3.tar.bz2  1 year and 9 months ago 181 main
conda 6.6 MB | osx-64/rnashapes-3.3.2-pl5321h85dcccf_3.tar.bz2  1 year and 10 months ago 109 main
conda 7.1 MB | osx-64/rnashapes-3.3.2-pl5321hcd10b59_2.tar.bz2  3 years and 23 days ago 3062 main
conda 7.1 MB | osx-64/rnashapes-3.3.0-pl5321hcd10b59_7.tar.bz2  3 years and 23 days ago 2131 main
conda 5.6 MB | linux-64/rnashapes-3.3.0-pl5321h9f5acd7_7.tar.bz2  3 years and 24 days ago 242 main
conda 5.6 MB | linux-64/rnashapes-3.3.2-pl5321h9f5acd7_2.tar.bz2  3 years and 24 days ago 1121 main
conda 5.9 MB | linux-64/rnashapes-3.3.0-pl5321h7d875b9_6.tar.bz2  3 years and 2 months ago 225 main
conda 5.9 MB | linux-64/rnashapes-3.3.2-pl5321h7d875b9_1.tar.bz2  3 years and 2 months ago 1104 main
conda 6.8 MB | osx-64/rnashapes-3.3.0-pl5321hb280591_6.tar.bz2  3 years and 2 months ago 187 main
conda 6.9 MB | osx-64/rnashapes-3.3.2-pl5321hb280591_1.tar.bz2  3 years and 2 months ago 1174 main
conda 6.9 MB | osx-64/rnashapes-3.3.2-pl5262hb280591_0.tar.bz2  3 years and 10 months ago 1530 main
conda 5.9 MB | linux-64/rnashapes-3.3.2-pl5262h7d875b9_0.tar.bz2  3 years and 10 months ago 1212 main
conda 6.0 MB | linux-64/rnashapes-3.3.0-pl5262h7d875b9_5.tar.bz2  3 years and 11 months ago 260 main
conda 505.6 kB | linux-64/rnashapes-2.1.6-h779adbc_4.tar.bz2  3 years and 11 months ago 3040 main
conda 6.9 MB | osx-64/rnashapes-3.3.0-pl5262hb280591_5.tar.bz2  3 years and 11 months ago 124 main
conda 6.6 MB | osx-64/rnashapes-3.3.0-pl526ha1b3eb9_4.tar.bz2  4 years and 3 months ago 859 main
conda 5.2 MB | linux-64/rnashapes-3.3.0-pl526hc9558a2_4.tar.bz2  4 years and 3 months ago 315 main
conda 5.3 MB | linux-64/rnashapes-3.3.0-pl526hc9558a2_3.tar.bz2  4 years and 9 months ago 802 main
conda 495.2 kB | linux-64/rnashapes-2.1.6-h516909a_3.tar.bz2  5 years and 4 months ago 1764 main
conda 494.7 kB | linux-64/rnashapes-2.1.6-h14c3975_2.tar.bz2  5 years and 10 months ago 699 main
conda 1.1 MB | linux-64/rnashapes-2.1.6-1.tar.bz2  6 years and 8 months ago 1269 main cf201901
conda 5.0 MB | linux-64/rnashapes-3.3.0-pl5.22.0_0.tar.bz2  7 years and 10 months ago 2464 main cf201901
conda 1.1 MB | linux-64/rnashapes-2.1.6-0.tar.bz2  9 years and 2 months ago 2766 main cf201901

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