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Package Name Access Summary Updated
coot-headless public Coot Headless API - Software for macromolecular model building. 2026-02-14
gseapy public Gene Set Enrichment Analysis in Python. 2026-02-14
raxtax public raxtax is a k-mer-based non-Bayesian Taxonomic Classifier. 2026-02-14
recmpox public RecMpox flags potential recombination events in monkeypox consensus genomes. 2026-02-14
hymet public HYMET provides hybrid Mash+minimap2 metagenomic classification with benchmark and case-study tooling. 2026-02-14
ribotricer public Python package to detect translating ORF from Ribo-seq data 2026-02-14
ncbi-datasets-pyclient public NCBI Datasets API 2026-02-14
galaxy-data public The Galaxy models, datatype framework, and datatype implementations. 2026-02-14
genomesyn2 public A Comparative Genomics Framework Integrating Synteny Visualization 2026-02-14
kompot public Differential abundance and gene expression analysis using Mahalanobis distance with JAX backend 2026-02-14
synth-nmr public NMR spectroscopy calculations for protein structures 2026-02-14
heatcluster public A Python tool for visualizing SNP matrices with hierarchical clustering 2026-02-14
vamos public VNTR annotation using efficient motif selection. 2026-02-14
gottcha2 public Genomic Origin Through Taxonomic CHAllenge (GOTTCHA) v2. 2026-02-14
pybigtools public pybigtools: Python bindings to the Bigtools Rust library for high-performance BigWig and BigBed I/O 2026-02-13
chamois public Chemical Hierarchy Approximation for secondary Metabolism clusters Obtained In Silico. 2026-02-13
bammap2 public A fast BAM file mapping tool 2026-02-13
mist_typing public MiST is a rapid, accurate and flexible (core-genome) multi-locus sequence typing (MLST) allele caller. 2026-02-13
pybiolib public BioLib Python Client. 2026-02-13
snakedeploy public Helper for deploying published Snakemake pipelines. 2026-02-13
emu public Emu is a relative abundance estimator for 16s genomic data. 2026-02-13
foldtree public Foldtree creates phylogenetic trees from protein structures using Foldseek. 2026-02-13
seqnado public A unified and user-friendly collection of pipelines for: ATAC-seq, ChIP-seq, CUT&RUN/TAG, RNA-seq, WGS, Methylation (Bisulphite/TAPS), CRISPR screens and Micro-Capture-C. 2026-02-13
ref-solver public Solve reference genome identification from BAM/SAM headers. 2026-02-13
metabolabpy public Python package to process 1D and 2D NMR spectroscopic data for metabolomics and tracer-based metabolism analysis. 2026-02-13

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