bioconda / packages / bioconductor-tfbstools 1.36.0

Software Package for Transcription Factor Binding Site (TFBS) Analysis

Installers

Info: This package contains files in non-standard labels.
  • linux-64 v1.36.0
  • osx-64 v1.36.0

conda install

To install this package run one of the following:
conda install -c bioconda bioconductor-tfbstools
conda install -c "bioconda/label/cf201901" bioconductor-tfbstools
conda install -c "bioconda/label/gcc7" bioconductor-tfbstools

Description

TFBSTools is a package for the analysis and manipulation of transcription factor binding sites. It includes matrices conversion between Position Frequency Matirx (PFM), Position Weight Matirx (PWM) and Information Content Matrix (ICM). It can also scan putative TFBS from sequence/alignment, query JASPAR database and provides a wrapper of de novo motif discovery software.


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