|
enrichm
|
public |
EnrichM is a toolbox for comparing the functional composition of population genomes.
|
2025-08-28 |
|
schemarefinery
|
public |
Tool to refine cg/wgMLST Schemas.
|
2025-08-28 |
|
vcfsim
|
public |
Script for generating simulated VCF's leveraging a coalescent simulating backend.
|
2025-08-28 |
|
bbmapy
|
public |
A Python wrapper for BBTools.
|
2025-08-28 |
|
clam
|
public |
clam is a tool for classification of callable loci intervals, and accurate estimation of population genetic statistics.
|
2025-08-28 |
|
cogent3
|
public |
COmparative GENomics Toolkit 3: genomic sequence analysis within notebooks or on compute systems with 1000s of CPUs.
|
2025-08-28 |
|
latch
|
public |
The Latch python bioinformatics framework.
|
2025-08-28 |
|
nanomotif
|
public |
Identifying methlyation motifs in nanopore data
|
2025-08-28 |
|
bioconductor-motifmatchr
|
public |
Fast Motif Matching in R.
|
2025-08-28 |
|
r-archr
|
public |
This package is designed to streamline scATAC analyses in R.
|
2025-08-28 |
|
seqmap
|
public |
SeqMap is a tool for mapping large amount of oligonucleotide to the genome.
|
2025-08-28 |
|
locidex
|
public |
Locidex: Common search engine for similarity based typing applications.
|
2025-08-28 |
|
open-cravat
|
public |
OpenCRAVAT - variant analysis toolkit
|
2025-08-28 |
|
primalbedtools
|
public |
A collection of tools for working with primer.bed files.
|
2025-08-28 |
|
nbitk
|
public |
nbitk: Naturalis BioInformatics ToolKit
|
2025-08-28 |
|
captus
|
public |
Captus: Assembly of Phylogenomic Datasets from High-Throughput Sequencing data.
|
2025-08-28 |
|
strangepg
|
public |
Strange pangenome-scale interactive graph visualizer
|
2025-08-28 |
|
crass
|
public |
Crass (The CRISPR Assembler) is a program that searches through raw metagenomic reads for Clustered Regularly Interspersed Short Palindromic Repeats
|
2025-08-28 |
|
epimetheus-py
|
public |
Cli tool for fast lookup in pileup for motif methylation
|
2025-08-28 |
|
phcue-ck
|
public |
phcue-ck (pronounced "F-Q-Seek") is a simple tool to get FTP urls for FASTQ files on ENA.
|
2025-08-28 |
|
usearch
|
public |
USEARCH is a unique sequence analysis tool which offers search and clustering algorithms that are often orders of magnitude faster than BLAST.
|
2025-08-28 |
|
sistem
|
public |
A tool for simulating tumor growth, metastasis, and DNA-seq data.
|
2025-08-28 |
|
damidseq_pipeline
|
public |
An automated pipeline for processing DamID sequencing datasets.
|
2025-08-28 |
|
phist
|
public |
Phage-Host Interaction Search Tool.
|
2025-08-28 |
|
orthologer
|
public |
Ortholog detection for comparative genomics and fast functional annotation behind OrthoDB and BUSCO.
|
2025-08-28 |
