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bioconductor-mgnifyr
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public |
R interface to EBI MGnify metagenomics resource
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2025-03-25 |
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bioconductor-dar
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public |
Differential Abundance Analysis by Consensus
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2025-03-25 |
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bioconductor-zitools
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public |
Analysis of zero-inflated count data
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2025-03-25 |
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bioconductor-multirnaflow
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public |
An R package for integrated analysis of temporal RNA-seq data with multiple biological conditions
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2025-03-25 |
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bioconductor-hybridexpress
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public |
Comparative analysis of RNA-seq data for hybrids and their progenitors
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2025-03-25 |
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bioconductor-metmashr
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public |
Metabolite Mashing with R
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2025-03-25 |
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bioconductor-micsqtl
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public |
MICSQTL (Multi-omic deconvolution, Integration and Cell-type-specific Quantitative Trait Loci)
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2025-03-25 |
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bioconductor-clusterfoldsimilarity
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public |
Calculate similarity of clusters from different single cell samples using foldchanges
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2025-03-25 |
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bioconductor-singlecellalleleexperiment
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public |
S4 Class for Single Cell Data with Allele and Functional Levels for Immune Genes
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2025-03-25 |
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bioconductor-multistateqtl
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public |
Toolkit for the analysis of multi-state QTL data
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2025-03-25 |
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bioconductor-txdbmaker
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public |
Tools for making TxDb objects from genomic annotations
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2025-03-25 |
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pdb2fasta
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public |
Convert PDB structures to FASTA sequences.
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2025-03-25 |
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suchtree
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public |
A python library for doing fast, thread-safe computations on phylogenetic trees
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2025-03-25 |
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bioconductor-cytomethic
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public |
DNA methylation-based classification and regression
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2025-03-25 |
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bioconductor-spillr
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public |
Spillover Compensation in Mass Cytometry Data
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2025-03-25 |
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bioconductor-mpac
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public |
Multi-omic Pathway Analysis of Cancer
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2025-03-25 |
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bioconductor-lute
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public |
Framework for cell size scale factor normalized bulk transcriptomics deconvolution experiments
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2025-03-25 |
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bioconductor-spanorm
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public |
Spatially-aware normalisation for spatial transcriptomics data
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2025-03-25 |
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lodei
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public |
Analyze differentially edited A-to-I regions in two sets of RNA-seq samples.
|
2025-03-25 |
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stripepy-hic
|
public |
StripePy recognizes architectural stripes in 3C and Hi-C contact maps using geometric reasoning
|
2025-03-25 |
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bioconductor-scdotplot
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public |
Cluster a Single-cell RNA-seq Dot Plot
|
2025-03-25 |
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bioconductor-deeptarget
|
public |
Deep characterization of cancer drugs
|
2025-03-25 |
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bioconductor-ctexplorer
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public |
Explores Cancer Testis Genes
|
2025-03-25 |
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bioconductor-knowyourcg
|
public |
Functional analysis of DNA methylome datasets
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2025-03-25 |
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bioconductor-spoon
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public |
Address the Mean-variance Relationship in Spatial Transcriptomics Data
|
2025-03-25 |
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bioconductor-visiumio
|
public |
Import Visium data from the 10X Space Ranger pipeline
|
2025-03-25 |
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bioconductor-xenlite
|
public |
Simple classes and methods for managing Xenium datasets
|
2025-03-25 |
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bioconductor-simpic
|
public |
simPIC: flexible simulation of paired-insertion counts for single-cell ATAC-sequencing data
|
2025-03-25 |
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bioconductor-pirat
|
public |
Precursor or Peptide Imputation under Random Truncation
|
2025-03-25 |
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bioconductor-methylimp2
|
public |
Missing value estimation of DNA methylation data
|
2025-03-25 |
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bioconductor-spatialsimgp
|
public |
Simulate Spatial Transcriptomics Data with the Mean-variance Relationship
|
2025-03-25 |
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bioconductor-tpsvg
|
public |
Thin plate models to detect spatially variable genes
|
2025-03-25 |
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bioconductor-limpca
|
public |
An R package for the linear modeling of high-dimensional designed data based on ASCA/APCA family of methods
|
2025-03-25 |
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bioconductor-catscradle
|
public |
This package provides methods for analysing spatial transcriptomics data and for discovering gene clusters
|
2025-03-25 |
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bioconductor-smoothclust
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public |
smoothclust
|
2025-03-25 |
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bioconductor-smartid
|
public |
Scoring and Marker Selection Method Based on Modified TF-IDF
|
2025-03-25 |
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bioconductor-betahmm
|
public |
A Hidden Markov Model Approach for Identifying Differentially Methylated Sites and Regions for Beta-Valued DNA Methylation Data
|
2025-03-25 |
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bioconductor-plyxp
|
public |
Data masks for SummarizedExperiment enabling dplyr-like manipulation
|
2025-03-25 |
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bioconductor-bettr
|
public |
A Better Way To Explore What Is Best
|
2025-03-25 |
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bioconductor-stabmap
|
public |
Stabilised mosaic single cell data integration using unshared features
|
2025-03-25 |
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bioconductor-piuma
|
public |
Phenotypes Identification Using Mapper from topological data Analysis
|
2025-03-25 |
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bioconductor-omxplore
|
public |
Vizualization tools for 'omics' datasets with R
|
2025-03-25 |
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pycoverm
|
public |
Python bindings for CoverM
|
2025-03-25 |
|
pymethylation_utils
|
public |
Python wrapper for the methylation_utils Rust binary
|
2025-03-25 |
|
bioconductor-dinor
|
public |
Differential NOMe-seq analysis
|
2025-03-25 |
|
bioconductor-scmultisim
|
public |
Simulation of Multi-Modality Single Cell Data Guided By Gene Regulatory Networks and Cell-Cell Interactions
|
2025-03-25 |
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bioconductor-hdxmsqc
|
public |
An R package for quality Control for hydrogen deuterium exchange mass spectrometry experiments
|
2025-03-25 |
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bioconductor-dominosignal
|
public |
Cell Communication Analysis for Single Cell RNA Sequencing
|
2025-03-25 |
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bioconductor-pgxrpi
|
public |
R wrapper for Progenetix
|
2025-03-25 |
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bioconductor-pepsettest
|
public |
Peptide Set Test
|
2025-03-25 |
