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djinn

Community

Convert your linked-read data between formats, almost like magic.

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::djinn

Usage Tracking

1.1
1.0.1
1.0
3 / 8 versions selected
Downloads (Last 6 months): 0

Description

There are disagreements between formats for linked-read data. Haplotagging thinks linked-read barcodes and FASTQ files should look one way, stLFR a different way, and TELLseq yet another. Djinn lets you convert to a standard format, convert between these FASTQ formats, barcode styles, etc. It also provides a convenient method to upload linked-read data to NCBI that preserves barcode information.

About

Summary

Convert your linked-read data between formats, almost like magic.

Last Updated

Oct 19, 2025 at 23:59

License

GPL-3.0-or-later

Total Downloads

134

Supported Platforms

noarch