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Convert your linked-read data between formats, almost like magic.

Installers

  • noarch v1.0.1

conda install

To install this package run one of the following:
conda install bioconda::djinn

Description

There are disagreements between formats for linked-read data. Haplotagging thinks linked-read barcodes and FASTQ files should look one way, stLFR a different way, and TELLseq yet another. Djinn lets you convert to a standard format, convert between these FASTQ formats, barcode styles, etc. It also provides a convenient method to upload linked-read data to NCBI that preserves barcode information.


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