djinn
Convert your linked-read data between formats, almost like magic.
Convert your linked-read data between formats, almost like magic.
To install this package, run one of the following:
There are disagreements between formats for linked-read data. Haplotagging thinks linked-read barcodes and FASTQ files should look one way, stLFR a different way, and TELLseq yet another. Djinn lets you convert to a standard format, convert between these FASTQ formats, barcode styles, etc. It also provides a convenient method to upload linked-read data to NCBI that preserves barcode information.
Summary
Convert your linked-read data between formats, almost like magic.
Last Updated
Oct 19, 2025 at 23:59
License
GPL-3.0-or-later
Total Downloads
134
Supported Platforms
GitHub Repository
https://github.com/pdimens/djinnDocumentation
https://pdimens.github.io/djinn