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esme_openmpi_5_0_6
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public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
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2025-03-25 |
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esme_pnetcdf_openmpi_5_0_6
|
public |
PnetCDF - Parallel netCDF
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2025-03-25 |
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esme_hdf5_openmpi_5_0_6
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-03-25 |
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ensembl-py
|
public |
Ensembl Python base library
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2025-03-25 |
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pigpen
|
public |
A package to quantify RNA localization using OINC-seq data
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2025-03-25 |
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micomplete
|
public |
Quality control of assembled genomes
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2025-03-25 |
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vcfexpress
|
public |
expressions on VCFs
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2025-03-25 |
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pupmapper
|
public |
Tool & python package for calculating genome wide pileup mappability.
|
2025-03-25 |
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seqlib
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public |
C++ interface to HTSlib, BWA-MEM and Fermi.
|
2025-03-25 |
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mutalyzer_hgvs_parser
|
public |
Mutalyzer HGVS variant description parser
|
2025-03-25 |
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met4j
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public |
Met4J is an open-source Java library dedicated to the structural analysis of metabolic networks
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2025-03-25 |
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genin2
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public |
Genin2 is a lightining-fast bioinformatic tool to predict genotypes for H5 viruses belonging to the European clade 2.3.4.4b
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2025-03-25 |
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souporcell
|
public |
Clustering scRNAseq by genotypes.
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2025-03-25 |
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metafx
|
public |
MetaFX (METAgenomic Feature eXtraction) is a library for feature extraction from whole-genome metagenome sequencing data and classification of groups of samples.
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2025-03-25 |
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s4pred
|
public |
Accurate prediction of a protein's secondary structure from its amino acid sequence
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2025-03-25 |
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fastoma
|
public |
FastOMA - a package to infer orthology information among proteomes
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2025-03-25 |
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neffy
|
public |
A Python interface of NEFFy C++ tool: NEFF Calculator and MSA File Converter
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2025-03-25 |
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tagbam
|
public |
A tool for tagging BAM files.
|
2025-03-25 |
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muat
|
public |
A package for Mutation Attention Tool
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2025-03-25 |
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wakhan
|
public |
A tool to analyze haplotype-specific chromosome-scale somatic copy number aberrations and aneuploidy using long reads
|
2025-03-25 |
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radiantkit
|
public |
Radiantkit is a Python package containing tools for full-stack image analysis YFISH images.
|
2025-03-25 |
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esme_openmpi_4_1_6
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
|
2025-03-25 |
|
esme_pnetcdf_openmpi_4_1_6
|
public |
PnetCDF - Parallel netCDF
|
2025-03-25 |
|
esme_netcdf-fortran_openmpi_4_1_6
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-03-25 |
|
esme_esmf_openmpi_4_1_6
|
public |
ESMF - Earth System Modeling Framework
|
2025-03-25 |
|
esme_hdf5_openmpi_4_1_6
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-03-25 |
|
esme_omb_openmpi_4_1_6
|
public |
OSU Micro Benchmarks
|
2025-03-25 |
|
esme_pio_openmpi_4_1_6
|
public |
ParallelIO - High-level parallel I/O library
|
2025-03-25 |
|
esme_netcdf-c_openmpi_4_1_6
|
public |
NetCDF-C - netCDF interface for C
|
2025-03-25 |
|
esme_pnetcdf_mpich_4_2_3
|
public |
PnetCDF - Parallel netCDF
|
2025-03-25 |
|
esme_esmf_mpich_4_2_3
|
public |
ESMF - Earth System Modeling Framework
|
2025-03-25 |
|
esme_omb_mpich_4_2_3
|
public |
OSU Micro Benchmarks
|
2025-03-25 |
|
esme_mpich_4_2_3
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
|
2025-03-25 |
|
esme_hdf5_mpich_4_2_3
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-03-25 |
|
esme_pio_mpich_4_2_3
|
public |
ParallelIO - High-level parallel I/O library
|
2025-03-25 |
|
esme_netcdf-fortran_mpich_4_2_3
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-03-25 |
|
esme_netcdf-c_mpich_4_2_3
|
public |
NetCDF-C - netCDF interface for C
|
2025-03-25 |
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adas
|
public |
adas is a sequence database search engine for long sequences. It is an innovative application of Minimizer, MinHash, Coreset and Hierarchical Navigable Small World Graphs (HNSW)
|
2025-03-25 |
|
corona_lineage_dynamics
|
public |
Analyzing and visualizing pangolin lineages of GISAID metadata.
|
2025-03-25 |
|
vpt-segmentation-packing
|
public |
Packs cell boundaries for the Vizgen vzg2 file format
|
2025-03-25 |
|
muset
|
public |
A pipeline for building an abundance unitig matrix from FASTA/FASTQ files
|
2025-03-25 |
|
ctyper
|
public |
Genotyping sequence-resolved copy-number variation using pangenomes.
|
2025-03-25 |
|
spp-dcj
|
public |
A tool for solving the small parsimony problem for natural genomes
|
2025-03-25 |
|
a3partitioner
|
public |
A bioinformatics tool for creating APOBEC3 and non-APOBEC3 partitions
|
2025-03-25 |
|
egap
|
public |
EGAP pipeline for genome assembly and QC analysis
|
2025-03-25 |
|
pb-cpg-tools
|
public |
Collection of tools for the analysis of CpG data
|
2025-03-25 |
|
get_pangenes
|
public |
A versatile software package for calling pangenes from whole genome alignments
|
2025-03-25 |
|
haplogrep3
|
public |
A tool for mtDNA haplogroup classification.
|
2025-03-25 |
|
frag_gene_scan_rs
|
public |
Rust implementation of the gene prediction model for short and error-prone reads
|
2025-03-25 |
|
autobigs-cli
|
public |
A CLI tool to rapidly fetch fetch MLST profiles given sequences for various diseases.
|
2025-03-25 |
