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bioconductor-flowfit
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public |
Estimate proliferation in cell-tracking dye studies
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2025-03-25 |
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bioconductor-cytodx
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public |
Robust prediction of clinical outcomes using cytometry data without cell gating
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2025-03-25 |
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bioconductor-chrogps
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public |
chroGPS2: Generation, visualization and differential analysis of epigenome maps
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2025-03-25 |
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bioconductor-chic
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public |
Quality Control Pipeline for ChIP-Seq Data
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2025-03-25 |
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bioconductor-rforproteomics
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public |
Companion package to the 'Using R and Bioconductor for proteomics data analysis' publication
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2025-03-25 |
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bioconductor-msmstests
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public |
LC-MS/MS Differential Expression Tests
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2025-03-25 |
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bioconductor-dapardata
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public |
Data accompanying the DAPAR and Prostar packages
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2025-03-25 |
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bioconductor-categorycompare
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public |
Meta-analysis of high-throughput experiments using feature annotations
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2025-03-25 |
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bioconductor-immunespacer
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public |
A Thin Wrapper around the ImmuneSpace Data and Tools Portal
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2025-03-25 |
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bioconductor-bioseqclass
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public |
Classification for Biological Sequences
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2025-03-25 |
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bioconductor-tfarm
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public |
Transcription Factors Association Rules Miner
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2025-03-25 |
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bioconductor-openprimerui
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public |
Shiny Application for Multiplex PCR Primer Design and Analysis
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2025-03-25 |
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bioconductor-openprimer
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public |
Multiplex PCR Primer Design and Analysis
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2025-03-25 |
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bioconductor-sevenbridges
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public |
Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R
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2025-03-25 |
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r-jackstraw
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public |
Test for association between the observed data and their systematic patterns of variations. Systematic patterns may be captured by latent variables using principal component analysis (PCA), factor analysis (FA), and related methods. The jackstraw enables statistical testing for association between observed variables and latent variables, as captured by PCs or other estimates. Similarly, unsupervised clustering, such as K-means clustering, partition around medoids (PAM), and others, finds subpopulations among the observed variables. The jackstraw estimates statistical significance of cluster membership, including unsupervised evaluation of cell identities in single cell RNA-seq. P-values and posterior probabilities allows one to rigorously evaluate the strength of cluster membership assignments.
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2025-03-25 |
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r-enrichr
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public |
Provides an R interface to all 'Enrichr' databases, a web-based tool for analysing gene sets and returns any enrichment of common annotated biological functions. <http://amp.pharm.mssm.edu/Enrichr/>.
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2025-03-25 |
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r-clvalid
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public |
Statistical and biological validation of clustering results.
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2025-03-25 |
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bioconductor-zebrafishrnaseq
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public |
Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014)
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2025-03-25 |
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bioconductor-ygs98frmavecs
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public |
This package was created by frmaTools version 1.19.3 and hgu133ahsentrezgcdf version 19.0.0.
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2025-03-25 |
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bioconductor-yeastrnaseq
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public |
Yeast RNA-Seq Experimental Data from Lee et al. 2008
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2025-03-25 |
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bioconductor-yeastnagalakshmi
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public |
Yeast genome RNA sequencing data based on Nagalakshmi et. al.
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2025-03-25 |
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bioconductor-yeastgsdata
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public |
Yeast Gold Standard Data
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2025-03-25 |
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bioconductor-wes.1kg.wugsc
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public |
Whole Exome Sequencing (WES) of chromosome 22 401st to 500th exon from the 1000 Genomes (1KG) Project by the Washington University Genome Sequencing Center (WUGSC).
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2025-03-25 |
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bioconductor-wavetilingdata
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public |
waveTiling Example Data
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2025-03-25 |
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bioconductor-vulcandata
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public |
VirtUaL ChIP-Seq data Analysis using Networks, dummy dataset
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2025-03-25 |
