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bioconductor-openprimerui

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Shiny Application for Multiplex PCR Primer Design and Analysis

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-openprimerui

Usage Tracking

1.24.0
1.22.0
1.20.0
1.16.0
1.14.0
5 / 8 versions selected
Total downloads: 0

Description

A Shiny application providing methods for designing, evaluating, and comparing primer sets for multiplex polymerase chain reaction. Primers are designed by solving a set cover problem such that the number of covered template sequences is maximized with the smallest possible set of primers. To guarantee that high-quality primers are generated, only primers fulfilling constraints on their physicochemical properties are selected.

About

Summary

Shiny Application for Multiplex PCR Primer Design and Analysis

Information Last Updated

Apr 22, 2025 at 15:29

License

GPL-2

Total Downloads

21.4K

Platforms

noarch Version: 1.24.0