| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-semisup | public | Semi-Supervised Mixture Model | 2025-04-22 |
| manorm | public | A robust model for quantitative comparison of ChIP-Seq data sets. | 2025-04-22 |
| micro_razers | public | MicroRazerS - Rapid Alignment of Small RNA Reads | 2025-04-22 |
| bioconductor-fithic | public | Confidence estimation for intra-chromosomal contact maps | 2025-04-22 |
| valet | public | Pipeline for detecting mis-assemblies in metagenomic assemblies | 2025-04-22 |
| bioconductor-farms | public | FARMS - Factor Analysis for Robust Microarray Summarization | 2025-04-22 |
| nest | public | NEST is a simulator for spiking neural network models. | 2025-04-22 |
| bioconductor-cnanorm | public | A normalization method for Copy Number Aberration in cancer samples | 2025-04-22 |
| bioconductor-clonality | public | Clonality testing | 2025-04-22 |
| bioconductor-clomial | public | Infers clonal composition of a tumor | 2025-04-22 |
| bioconductor-wiggleplotr | public | Make read coverage plots from BigWig files | 2025-04-22 |
| bioconductor-raggedexperiment | public | Representation of Sparse Experiments and Assays Across Samples | 2025-04-22 |
| bioconductor-somaticsignatures | public | Somatic Signatures | 2025-04-22 |
| bioconductor-netreg | public | Network-Regularized Regression Models | 2025-04-22 |
| bioconductor-chromdraw | public | chromDraw is a R package for drawing the schemes of karyotypes in the linear and circular fashion. | 2025-04-22 |
| bioconductor-cleaver | public | Cleavage of Polypeptide Sequences | 2025-04-22 |
| bioconductor-chromplot | public | Global visualization tool of genomic data | 2025-04-22 |
| bioconductor-arrayexpress | public | Access the ArrayExpress Collection at EMBL-EBI Biostudies and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet | 2025-04-22 |
| bioconductor-ioniser | public | Quality Assessment Tools for Oxford Nanopore MinION data | 2025-04-22 |
| fastqmetrics | public | Extract metrics from a fastq file, streaming | 2025-04-22 |
| phylopandas | public | Pandas for phylogenetics | 2025-04-22 |
| polymutt | public | Li B, Chen W, Zhan X, Busonero F, Sanna S, et al. (2012) A Likelihood-Based Framework for Variant Calling and De Novo Mutation Detection in Families. PLoS Genet 8(10): e1002944. doi:10.1371/journal.pgen.1002944 | 2025-04-22 |
| bioconductor-rcy3 | public | Functions to Access and Control Cytoscape | 2025-04-22 |
| snpomatic | public | SNP-o-matic is a fast, stringent short-read mapping software. | 2025-04-22 |
| perl-file-copy-link | public | Perl extension for replacing a link by a copy of the linked file. | 2025-04-22 |
