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bioconductor-interminer
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public |
R Interface with InterMine-Powered Databases
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2025-04-22 |
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bioconductor-apeglm
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public |
Approximate posterior estimation for GLM coefficients
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2025-04-22 |
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microbecensus
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public |
A command-line tool for estimating average genome size from shotgun sequence data
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2025-04-22 |
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drax
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public |
A pipeline for Detecting Resistome Associated taXa.
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2025-04-22 |
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cannoli
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public |
Distributed execution of bioinformatics tools on Apache Spark
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2025-04-22 |
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fast5-research
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public |
ONT Research fast5 read/write package
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2025-04-22 |
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protk
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public |
protk (Proteomics toolkit)
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2025-04-22 |
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chromosomer
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public |
A reference-assisted assembly tool for producing draft chromosome sequences.
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2025-04-22 |
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bioformats
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public |
A collection of Python classes to handle bioinformatics data.
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2025-04-22 |
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telseq
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public |
A software for calculating telomere length
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2025-04-22 |
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skmer
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public |
Assembly-free and alignment-free tool for estimating genomic distances between genome-skims
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2025-04-22 |
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ctat-metagenomics
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public |
ctat-metagenomics uses centrifuge
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2025-04-22 |
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bioconductor-nadfinder
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public |
Call wide peaks for sequencing data
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2025-04-22 |
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bioconductor-maftools
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public |
Summarize, Analyze and Visualize MAF Files
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2025-04-22 |
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suppa
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public |
A tool to study splicing across multiple conditions at high speed and accuracy.
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2025-04-22 |
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tpp
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public |
The Trans-Proteomic Pipeline (TPP) is a collection of integrated tools for MS/MS proteomics developed at the Seattle Proteome Center. The Bioconda package includes the command-line versions of the TPP toolset. These programs include tools for validation (PeptideProphet, iProphet, ProteinProphet, Mayu) and quantification (XPRESS, ASAPRatio, Libra) as well as a number of parsers and converters (Out2XML, Mascot2XML, Tandem2XML, etc).
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2025-04-22 |
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perl-findbin-libs
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public |
locate and a 'use lib' or export directories based on $FindBin::Bin.
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2025-04-22 |
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perl-module-fromperlver
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public |
install modules compatible with the running perl.
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2025-04-22 |
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k-slam
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public |
k-SLAM is a program for alignment based metagenomic analysis of large sets of high-throughput sequence data.
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2025-04-22 |
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straitrazor
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public |
The STR Allele Identification Tool
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2025-04-22 |
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circularmapper
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public |
A method to improve mappings on circular genomes, using the BWA mapper.
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2025-04-22 |
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damageprofiler
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public |
A Java based tool to determine damage patterns on ancient DNA as a replacement for mapDamage
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2025-04-22 |
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r-hemdag
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public |
a collection of Hierarchical Ensemble Methods (HEMs) for Directed Acyclic Graphs (DAGs).
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2025-04-22 |
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adapterremovalfixprefix
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public |
Fixes adapter removal prefixes to make sure no clashing read names are in the output.
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2025-04-22 |
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r-perfmeas
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public |
Package that implements different performance measures for classification and ranking tasks. AUC, precision at a given recall, F-score for single and multiple classes are available.
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2025-04-22 |
