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bioconda / packages

Package Name Access Summary Updated
perl-mce public Many-Core Engine for Perl providing parallel processing capabilities 2025-09-10
perl-image-exiftool public ExifTool is a platform-independent Perl library plus a command-line application for reading, writing and editing meta information in a wide variety of files. 2025-09-10
addrg public No Summary 2025-09-10
rascaf public Scaffolding with RNA-seq read alignment. 2025-09-10
pathoscope public Species identification and strain attribution with unassembled sequencing data 2025-09-10
splicemap public Detects splice junctions from RNA-seq data. This method does not depend on any existing annotation of gene structures and is capable of finding novel splice junctions with high sensitivity and specificity. It can handle long reads (50–100 nt) and can exploit paired-read information to improve mapping accuracy. 2025-09-10
hardklor public Analyze mass spectra 2025-09-10
gxformat2 public Galaxy Workflow Format 2 Descriptions. 2025-09-10
antismash public antiSMASH - the antibiotics and Secondary Metabolite Analysis SHell. 2025-09-09
trimadap public Fast but inaccurate adapter trimmer for Illumina reads. 2025-09-09
fermikit public No Summary 2025-09-09
fermi2 public Fermi2 focuses on the exploration of FMD-index as a graph. 2025-09-09
htsbox public HTSbox is a fork of early HTSlib. It is a collection of small experimental tools manipulating HTS-related files. 2025-09-09
bfc public BFC is a standalone high-performance tool for correcting sequencing errors from Illumina sequencing data. 2025-09-09
velvet public Sequence Assembler for short reads 2025-09-09
svdb public structural variant database software 2025-09-09
portcullis public Splice junction analysis and filtering from BAM files 2025-09-09
locarna public Multiple alignment of RNAs 2025-09-09
popdel public Fast structural deletion calling on population-scale short read paired-end germline WGS data. 2025-09-09
kaiju public Fast and sensitive taxonomic classification for metagenomics 2025-09-09
groot public A tool for resistome profiling of metagenomic samples. 2025-09-09
bioconvert public Convert between bioinformatics formats 2025-09-08
wiggletools public The WiggleTools package allows genomewide data files to be manipulated as numerical functions, equipped with all the standard functional analysis operators (sum, product, product by a scalar, comparators), and derived statistics (mean, median, variance, stddev, t-test, Wilcoxon's rank sum test, etc). 2025-09-08
adapterremoval public The AdapterRemoval v2 tool for merging and clipping reads. 2025-09-08
perl-convert-binary-c public Binary Data Conversion using C Types 2025-09-08

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