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bioconda / packages

Package Name Access Summary Updated
hmnillumina public A parser for Illumina run 2025-08-21
bird_tool_utils_python public Python utilities used as part of the bird suite of bioinformatic tools. 2025-08-21
gentle public Software suite for DNA cloning 2025-08-21
disco public Multi-threaded Distributed Memory Overlap-Layout-Consensus (OLC) Metagenome Assembler. 2025-08-21
pcne public Estimates plasmid copy number from assembled genome. 2025-08-21
sparseassembler public No Summary 2025-08-21
macsyfinder public MacSyFinder: Detection of macromolecular systems in protein datasets using systems modelling and similarity search 2025-08-21
pyskani public PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining. 2025-08-21
dbg2olc public Efficient Assembly of Large Genomes Using Long Erroneous Reads of the Third Generation Sequencing Technologies 2025-08-21
assemblyutility public No Summary 2025-08-21
sparc public No Summary 2025-08-21
perl-findbin public Locate directory of original perl script. 2025-08-20
augustus public AUGUSTUS is a gene prediction program for eukaryotes written by Mario Stanke and Oliver Keller. It can be used as an ab initio program, which means it bases its prediction purely on the sequence. AUGUSTUS may also incorporate hints on the gene structure coming from extrinsic sources such as EST, MS/MS, protein alignments and synthenic genomic alignments. 2025-08-20
perl-module-corelist public What modules shipped with versions of perl. 2025-08-20
perl-bio-phylo public An object-oriented Perl toolkit for analyzing and manipulating phyloinformatic data. 2025-08-20
paraphase public HiFi-based caller for highly homologous genes 2025-08-20
perl-bio-bigfile public Low-level interface to BigWig & BigBed files 2025-08-20
perl-bio-db-hts public Read files using HTSlib including BAM/CRAM, Tabix and BCF database files 2025-08-20
bioconductor-singlecelltk public Comprehensive and Interactive Analysis of Single Cell RNA-Seq Data 2025-08-20
hmnfusion public Fusion analysis from DNA genomics. 2025-08-20
paml public A package of programs for phylogenetic analyses of DNA or protein sequences using maximum likelihood. 2025-08-20
sepp public SATe-enabled phylogenetic placement. 2025-08-20
bioconductor-dupradar public Assessment of duplication rates in RNA-Seq datasets 2025-08-20
predictosaurus public Predictosaurus is a command-line tool designed for uncertainty-aware haplotype-based genomic variant effect prediction. 2025-08-20
remag public Recovery of high-quality eukaryotic genomes from complex metagenomes 2025-08-20

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