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Package Name Access Summary Updated
bioconductor-dapar public Tools for the Differential Analysis of Proteins Abundance with R 2024-12-22
bioconductor-fission public RangedSummarizedExperiment for time course RNA-Seq of fission yeast in response to stress, by Leong et al., Nat Commun 2014. 2024-12-22
bioconductor-msdatahub public Mass Spectrometry Data on ExperimentHub 2024-12-22
bioconductor-msstatsqcgui public A graphical user interface for MSstatsQC package 2024-12-22
bioconductor-plyxp public Data masks for SummarizedExperiment enabling dplyr-like manipulation 2024-12-22
bioconductor-singlemoleculefootprintingdata public Data supporting the SingleMoleculeFootprinting pkg 2024-12-22
bioconductor-synapterdata public Data accompanying the synapter package 2024-12-22
bioconductor-lrcelltypemarkers public Marker gene information for LRcell R Bioconductor package 2024-12-22
bioconductor-biotmle public Targeted Learning with Moderated Statistics for Biomarker Discovery 2024-12-22
r-george public geoRge, a computational tool for stable isotope labelling detection in LC/MS-based untargeted metabolomics 2024-12-22
bioconductor-marinerdata public ExperimentHub data for the mariner package 2024-12-22
bioconductor-isobayes public IsoBayes: Single Isoform protein inference Method via Bayesian Analyses 2024-12-22
bioconductor-sesamedata public Supporting Data for SeSAMe Package 2024-12-22
bioconductor-faahko public Saghatelian et al. (2004) FAAH knockout LC/MS data 2024-12-22
bioconductor-bettr public A Better Way To Explore What Is Best 2024-12-22
bioconductor-nullrangesdata public ExperimentHub datasets for the nullranges package 2024-12-22
bioconductor-vsclust public Feature-based variance-sensitive quantitative clustering 2024-12-22
bioconductor-planttfhunter public Identification and classification of plant transcription factors 2024-12-22
bioconductor-benchmarkfdrdata2019 public Data and Benchmarking Results from Korthauer and Kimes et al. (2019) 2024-12-22
bioconductor-survclust public Identification Of Clinically Relevant Genomic Subtypes Using Outcome Weighted Learning 2024-12-22
bioconductor-oligoclasses public Classes for high-throughput arrays supported by oligo and crlmm 2024-12-22
bioconductor-spqn public Spatial quantile normalization 2024-12-22
bioconductor-pairkat public PaIRKAT 2024-12-22
bioconductor-gdr public Umbrella package for R packages in the gDR suite 2024-12-22
bioconductor-stabmap public Stabilised mosaic single cell data integration using unshared features 2024-12-22
bioconductor-made4 public Multivariate analysis of microarray data using ADE4 2024-12-22
r-minems2 public Mine MS-MS spectra using a frequent usbgraph mining approach. 2024-12-22
bioconductor-combi public Compositional omics model based visual integration 2024-12-22
bioconductor-singler public Reference-Based Single-Cell RNA-Seq Annotation 2024-12-22
bioconductor-cmapr public CMap Tools in R 2024-12-22
bioconductor-topdownr public Investigation of Fragmentation Conditions in Top-Down Proteomics 2024-12-22
r-alakazam public Provides methods for high-throughput adaptive immune receptor repertoire sequencing (AIRR-Seq; Rep-Seq) analysis. In particular, immunoglobulin (Ig) sequence lineage reconstruction, lineage topology analysis, diversity profiling, amino acid property analysis and gene usage. Citations: Gupta and Vander Heiden, et al (2017) <doi:10.1093/bioinformatics/btv359>, Stern, Yaari and Vander Heiden, et al (2014) <doi:10.1126/scitranslmed.3008879>. 2024-12-22
bioconductor-pcatools public PCAtools: Everything Principal Components Analysis 2024-12-22
bioconductor-multidataset public Implementation of MultiDataSet and ResultSet 2024-12-22
bioconductor-qplexanalyzer public Tools for quantitative proteomics data analysis 2024-12-22
bioconductor-saturn public Scalable Analysis of Differential Transcript Usage for Bulk and Single-Cell RNA-sequencing Applications 2024-12-22
bioconductor-rmassbank public Workflow to process tandem MS files and build MassBank records 2024-12-22
bioconductor-awst public Asymmetric Within-Sample Transformation 2024-12-22
bioconductor-beer public Bayesian Enrichment Estimation in R 2024-12-22
bioconductor-mai public Mechanism-Aware Imputation 2024-12-22
bioconductor-msmseda public Exploratory Data Analysis of LC-MS/MS data by spectral counts 2024-12-22
bioconductor-org.mxanthus.db public Genome wide annotation for Myxococcus xanthus DK 1622 2024-12-22
bioconductor-airway public RangedSummarizedExperiment for RNA-Seq in airway smooth muscle cells, by Himes et al PLoS One 2014 2024-12-22
bioconductor-genomicinstability public Genomic Instability estimation for scRNA-Seq 2024-12-22
bioconductor-alternativesplicingevents.hg19 public Alternative splicing event annotation for Human (hg19) 2024-12-22
bioconductor-dapardata public Data accompanying the DAPAR and Prostar packages 2024-12-21
bioconductor-ipddb public IPD IMGT/HLA and IPD KIR database for Homo sapiens 2024-12-21
bioconductor-hummingbird public Bayesian Hidden Markov Model for the detection of differentially methylated regions 2024-12-21
bioconductor-grasp2db public grasp2db, sqlite wrap of NHLBI GRASP 2.0, an extended GWAS catalog. 2024-12-21
bioconductor-peakpanther public Peak Picking and Annotation of High Resolution Experiments 2024-12-21

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