bioconductor-genomicinstability
Genomic Instability estimation for scRNA-Seq
Genomic Instability estimation for scRNA-Seq
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This package contain functions to run genomic instability analysis (GIA) from scRNA-Seq data. GIA estimates the association between gene expression and genomic location of the coding genes. It uses the aREA algorithm to quantify the enrichment of sets of contiguous genes (loci-blocks) on the gene expression profiles and estimates the Genomic Instability Score (GIS) for each analyzed cell.
Summary
Genomic Instability estimation for scRNA-Seq
Last Updated
Dec 22, 2024 at 00:00
License
file LICENSE
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