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bioconda / packages

Package Name Access Summary Updated
bioconductor-rhdf5 public R Interface to HDF5 2025-04-22
bioconductor-hdf5array public HDF5 datasets as array-like objects in R 2025-04-22
bioconductor-sparsematrixstats public Summary Statistics for Rows and Columns of Sparse Matrices 2025-04-22
rdeval public A general purpose, multithreaded read analysis and manipulation tool. 2025-04-22
perl-alien-build public Build external dependencies for use in CPAN 2025-04-22
perl-aceperl public Object-Oriented Access to ACEDB Databases 2025-04-22
perl-params-validate public Validate method/function parameters 2025-04-22
hmftools-cider public Determine a comprehensive list of CDR3 sequences for each of the IG and TCR loci from RNA and DNA sequence data. 2025-04-22
hmftools-teal public Characterises telomeres in tumor and normal samples from WGS data. 2025-04-22
bioconductor-biovizbase public Basic graphic utilities for visualization of genomic data. 2025-04-22
rust-gtars public Performance-critical tools to manipulate, analyze, and process genomic interval data. 2025-04-22
pigpen public A package to quantify RNA localization using OINC-seq data. 2025-04-22
bioconda-repodata-patches public generate tweaks to index metadata, hosted separately from anaconda.org index 2025-04-22
zol public zol (& fai): large-scale targeted detection and evolutionary investigation of gene clusters. 2025-04-21
r-cobrar public COnstraint-based Reconstruction and Analysis (COBRA) of metabolic networks in R 2025-04-21
open-cravat public OpenCRAVAT - variant analysis toolkit 2025-04-21
gsmap public gsMap (genetically informed spatial mapping of cells for complex traits). 2025-04-21
gtotree public GToTree is a user-friendly workflow for phylogenomics. 2025-04-21
dmox public Rust-based demultiplexing of haplotagging linked-read data. 2025-04-21
bioconductor-shortread public FASTQ input and manipulation 2025-04-21
annembed public annembed is an ultra-fast and scalable non-linear dimension reduction/embedding algorithm (similar to UMAP or t-SNE) for large-scale biological data 2025-04-21
bioconductor-beachmat public Compiling Bioconductor to Handle Each Matrix Type 2025-04-21
bioconductor-rhdf5filters public HDF5 Compression Filters 2025-04-21
r-dimsum public An error model and pipeline for analyzing deep mutational scanning (DMS) data and diagnosing common experimental pathologies 2025-04-21
bioconductor-pwalign public Perform pairwise sequence alignments 2025-04-21

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