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solote
|
public |
A conversion utility is conveniently packaged with SoloTE, in order to tranform the RepeatMasker out file to the BED format required by SoloTE
|
2025-04-22 |
|
haplink
|
public |
Viral haplotype calling via linkage disequilibrium
|
2025-04-22 |
|
magus-msa
|
public |
Multiple Sequence Alignment using Graph Clustering
|
2025-04-22 |
|
ale-core
|
public |
ALE: Assembly Likelihood Estimator. Core C implemented scoring programs only without supplementary plotting scripts.
|
2025-04-22 |
|
tracknado
|
public |
CLI library to generate UCSC trackhubs from sequencing data
|
2025-04-22 |
|
aligncov
|
public |
Obtain tidy alignment coverage info from sorted BAM files
|
2025-04-22 |
|
allo
|
public |
Multi-mapped read rescue strategy for gene regulatory analyses
|
2025-04-22 |
|
mira-moods
|
public |
MOODS: Motif Occurrence Detection Suite
|
2025-04-22 |
|
gimbleprep
|
public |
Preprocess fasta, bam and vcf files ready to be used by gimble
|
2025-04-22 |
|
rsrq
|
public |
A minimal Redis-backed queue system.
|
2025-04-22 |
|
ksnp
|
public |
k-mer based haplotype assembly
|
2025-04-22 |
|
tcdemux
|
public |
Demultiplex files and prepare reads for the target capture analysis pipeline.
|
2025-04-22 |
|
cmsearch_tblout_deoverlap
|
public |
cmsearch-deoverlap.pl: remove lower scoring overlaps from cmsearch
|
2025-04-22 |
|
rich-msa
|
public |
A Rich renderable for viewing Multiple Sequence Alignments in the terminal.
|
2025-04-22 |
|
cytosnake
|
public |
Orchestrating high-dimensional cell morphology data processing pipelines
|
2025-04-22 |
|
sfs
|
public |
CLI tool for site frequency spectra.
|
2025-04-22 |
|
tsebra
|
public |
TSEBRA is a combiner tool that selects transcripts from gene predictions based on the support by extrisic evidence in form of introns and start/stop codons.
|
2025-04-22 |
|
noah-cli
|
public |
a project management tool for reproducible, portable, and streamlined bioinformatics analysis
|
2025-04-22 |
|
cstag-cli
|
public |
Command line interface of cstag to manipulate the minimap2's CS tag
|
2025-04-22 |
|
sylph
|
public |
sylph quickly enables querying of genomes against even low-coverage shotgun metagenomes to find nearest neighbour ANI.
|
2025-04-22 |
|
ms-entropy
|
public |
This package provides a Python implementation of calculating spectral entropy, entropy similarity, and Flash entropy search for mass spectrometry data.
|
2025-04-22 |
|
happy-python
|
public |
Haploidy and Size Completeness Estimation with Python
|
2025-04-22 |
|
dnamarkmaker
|
public |
DNAMarkMaker: pipeline to development ARMS and CAPS marker
|
2025-04-22 |
|
kinship-read
|
public |
Relationship Estimation from Ancient DNA version 2 (READv2)
|
2025-04-22 |
|
crispector2
|
public |
Accurate estimation of off-target editing activity from comparative NGS data
|
2025-04-22 |
