snpick
A fast and memory-efficient tool for SNP extraction from genomic alignments.
A fast and memory-efficient tool for SNP extraction from genomic alignments.
To install this package, run one of the following:
snpick is a Rust-based tool designed for extracting SNPs efficiently from large genomic alignments, with minimal RAM usage and high performance. It outputs variable sites in alignment files and provides VCF generation.
Summary
A fast and memory-efficient tool for SNP extraction from genomic alignments.
Last Updated
Nov 19, 2024 at 21:59
License
GPL-3.0-or-later
Total Downloads
656
Supported Platforms
GitHub Repository
https://github.com/PathoGenOmics-Lab/snpickDocumentation
https://github.com/PathoGenOmics-Lab/snpick