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bioconductor-champ
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public |
Chip Analysis Methylation Pipeline for Illumina HumanMethylation450 and EPIC
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2023-06-16 |
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perl-probe-perl
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public |
Information about the currently running perl
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2023-06-16 |
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bioconductor-pbase
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public |
Manipulating and exploring protein and proteomics data
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2023-06-16 |
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bioconductor-yaqcaffy
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public |
Affymetrix expression data quality control and reproducibility analysis
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2023-06-16 |
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bioconductor-plasfia
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public |
FIA-HRMS plasma dataset
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2023-06-16 |
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bioconductor-proteomicsannotationhubdata
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public |
Transform public proteomics data resources into Bioconductor Data Structures
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2023-06-16 |
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bioconductor-mmpalatemirna
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public |
Murine Palate miRNA Expression Analysis
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2023-06-16 |
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bioconductor-metaseqr
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public |
An R package for the analysis and result reporting of RNA-Seq data by combining multiple statistical algorithms.
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2023-06-16 |
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bioconductor-rhvdm
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public |
A R implementation of HVDM (Genome Biol 2006, V7(3) R25)
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2023-06-16 |
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r-plsgenomics
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public |
Routines for PLS-based genomic analyses, implementing PLS methods for classification with microarray data and prediction of transcription factor activities from combined ChIP-chip analysis. The >=1.2-1 versions include two new classification methods for microarray data: GSIM and Ridge PLS. The >=1.3 versions includes a new classification method combining variable selection and compression in logistic regression context: logit-SPLS; and an adaptive version of the sparse PLS.
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2023-06-16 |
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sbg-cwl-runner
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public |
A CWL Runner for SBG platform
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2023-06-16 |
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refinem
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public |
A toolbox for improving population genomes.
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2023-06-16 |
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perl-test-script
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public |
Basic cross-platform tests for scripts
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2023-06-16 |
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bioconductor-powerexplorer
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public |
Power Estimation Tool for RNA-Seq and proteomics data
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2023-06-16 |
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r-mess
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public |
A mixed collection of useful and semi-useful diverse statistical functions, some of which may even be referenced in The R Primer book.
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2023-06-16 |
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bioconductor-mulder2012
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public |
Predicting functional networks and modules of chromatin factors controlling adult stem cell fate from RNA interference screens
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2023-06-16 |
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perl-bio-rna-rnaalisplit
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public |
Split and deconvolute structural RNA multiple sequence alignments
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2023-06-16 |
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bioconductor-htsanalyzer
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public |
Gene set over-representation, enrichment and network analyses for high-throughput screens
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2023-06-16 |
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bioconductor-maqcsubsetafx
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public |
MAQC data subset for the Affymetrix platform
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2023-06-16 |
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r-rismed
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public |
A set of tools to extract bibliographic content from the National Center for Biotechnology Information (NCBI) databases, including PubMed. The name RISmed is a portmanteau of RIS (for Research Information Systems, a common tag format for bibliographic data) and PubMed.
|
2023-06-16 |
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bioconductor-dualks
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public |
Dual KS Discriminant Analysis and Classification
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2023-06-16 |
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nullarbor
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public |
Reads to report pipeline for bacterial isolate NGS data
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2023-06-16 |
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bioconductor-allenpvc
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public |
GEO accession data GSE71585 as a SingleCellExperiment
|
2023-06-16 |
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bioconductor-scisi
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public |
In Silico Interactome
|
2023-06-16 |
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bioconductor-gcmap
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public |
Tools for Connectivity Map-like analyses
|
2023-06-16 |
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bioconductor-imetagene
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public |
A graphical interface for the metagene package
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2023-06-16 |
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bioconductor-arraytv
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public |
Implementation of wave correction for arrays
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2023-06-16 |
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bioconductor-missmethyl
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public |
Analysing Illumina HumanMethylation BeadChip Data
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2023-06-16 |
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bioconductor-timeseriesexperiment
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public |
Analysis for short time-series data
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2023-06-16 |
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bioconductor-cve
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public |
Cancer Variant Explorer
|
2023-06-16 |
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bioconductor-anamir
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public |
An integrated analysis package of miRNA and mRNA expression data
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2023-06-16 |
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bioconductor-slgi
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public |
Synthetic Lethal Genetic Interaction
|
2023-06-16 |
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bioconductor-expressionview
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public |
Visualize biclusters identified in gene expression data
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2023-06-16 |
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bioconductor-migsa
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public |
Massive and Integrative Gene Set Analysis
|
2023-06-16 |
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bioconductor-pathwaysplice
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public |
An R Package for Unbiased Splicing Pathway Analysis
|
2023-06-16 |
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bioconductor-gcmapweb
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public |
A web interface for gene-set enrichment analyses
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2023-06-16 |
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bioconductor-impulsede2
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public |
Differential expression analysis of longitudinal count data sets
|
2023-06-16 |
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r-imp4p
|
public |
Functions to analyse missing value mechanisms and to impute data sets in the context of bottom-up MS-based proteomics.
|
2023-06-16 |
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bioconductor-methylgsa
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public |
Gene Set Analysis Using the Outcome of Differential Methylation
|
2023-06-16 |
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bioconductor-pcpheno
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public |
Phenotypes and cellular organizational units
|
2023-06-16 |
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bioconductor-ppistats
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public |
Protein-Protein Interaction Statistical Package
|
2023-06-16 |
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bioconductor-eisa
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public |
Expression data analysis via the Iterative Signature Algorithm
|
2023-06-16 |
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bioconductor-tcgabiolinksgui
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public |
"TCGAbiolinksGUI: A Graphical User Interface to analyze cancer molecular and clinical data"
|
2023-06-16 |
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bioconductor-meal
|
public |
Perform methylation analysis
|
2023-06-16 |
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bioconductor-genogam
|
public |
A GAM based framework for analysis of ChIP-Seq data
|
2023-06-16 |
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bioconductor-dbchip
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public |
Differential Binding of Transcription Factor with ChIP-seq
|
2023-06-16 |
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bioconductor-celltree
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public |
Inference and visualisation of Single-Cell RNA-seq data as a hierarchical tree structure
|
2023-06-16 |
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meta-sparse
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public |
SPARSE indexes reference genomes in public databases into hierarchical clusters and uses it to predict origins of metagenomic reads.
|
2023-06-16 |
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bioconductor-mesh.syn.eg.db
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public |
Mapping table for Cyanobacteria Gene ID to MeSH
|
2023-06-16 |
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bioconductor-mesh.osa.eg.db
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public |
Mapping table for Oryza sativa Japonica Gene ID to MeSH
|
2023-06-16 |
