| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-outlierd | public | Outlier detection using quantile regression on the M-A scatterplots of high-throughput data | 2025-04-22 |
| bioconductor-otubase | public | Provides structure and functions for the analysis of OTU data | 2025-04-22 |
| bioconductor-oscope | public | Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq | 2025-04-22 |
| bioconductor-osat | public | OSAT: Optimal Sample Assignment Tool | 2025-04-22 |
| bioconductor-omiccircos | public | High-quality circular visualization of omics data | 2025-04-22 |
| bioconductor-omicade4 | public | Multiple co-inertia analysis of omics datasets | 2025-04-22 |
| bioconductor-olin | public | Optimized local intensity-dependent normalisation of two-color microarrays | 2025-04-22 |
| bioconductor-ogsa | public | Outlier Gene Set Analysis | 2025-04-22 |
| bioconductor-occugene | public | Functions for Multinomial Occupancy Distribution | 2025-04-22 |
| bioconductor-nudge | public | Package for normalizing microarray data in single and multiple replicate experiments and fitting a normal-uniform mixture to detect differentially expressed genes in the cases where the two samples are being compared directly or indirectly (via a common reference sample) | 2025-04-22 |
| bioconductor-nucler | public | Nucleosome positioning package for R | 2025-04-22 |
| bioconductor-nucleosim | public | Generate synthetic nucleosome maps | 2025-04-22 |
| bioconductor-ntw | public | Predict gene network using an Ordinary Differential Equation (ODE) based method | 2025-04-22 |
| bioconductor-npgsea | public | Permutation approximation methods for gene set enrichment analysis (non-permutation GSEA) | 2025-04-22 |
| bioconductor-nnnorm | public | Spatial and intensity based normalization of cDNA microarray data based on robust neural nets | 2025-04-22 |
| bioconductor-netbiov | public | A package for visualizing complex biological network | 2025-04-22 |
| bioconductor-nem | public | (Dynamic) Nested Effects Models and Deterministic Effects Propagation Networks to reconstruct phenotypic hierarchies | 2025-04-22 |
| bioconductor-ncigraph | public | Pathways from the NCI Pathways Database | 2025-04-22 |
| bioconductor-myvariant | public | Accesses MyVariant.info variant query and annotation services | 2025-04-22 |
| bioconductor-mzid | public | An mzIdentML parser for R | 2025-04-22 |
| bioconductor-mvgst | public | mvGST provides platform-independent tools to identify GO terms (gene sets) that are differentially active (up or down) in multiple contrasts of interest. Given a matrix of one-sided p-values (rows for genes, columns for contrasts), mvGST uses meta-analytic methods to combine p-values for all genes annotated to each gene set, and then classify each gene set as being significantly more active (1), less active (-1), or not significantly differentially active (0) in each contrast of interest. With multiple contrasts of interest, each gene set is assigned to a profile (across contrasts) of differential activity. Tools are also provided for visualizing (in a GO graph) the gene sets classified to a given profile. | 2025-04-22 |
| bioconductor-mvcclass | public | Model-View-Controller (MVC) Classes | 2025-04-22 |
| bioconductor-multiscan | public | R package for combining multiple scans | 2025-04-22 |
| bioconductor-multimed | public | Testing multiple biological mediators simultaneously | 2025-04-22 |
| bioconductor-mulcom | public | Calculates Mulcom test | 2025-04-22 |
