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bioconductor-nucleosim

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Generate synthetic nucleosome maps

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-nucleosim

Usage Tracking

1.34.0
1.30.0
1.28.0
1.26.0
1.22.0
5 / 8 versions selected
Total downloads: 0

Description

This package can generate a synthetic map with reads covering the nucleosome regions as well as a synthetic map with forward and reverse reads emulating next-generation sequencing. The synthetic hybridization data of “Tiling Arrays” can also be generated. The user has choice between three different distributions for the read positioning: Normal, Student and Uniform. In addition, a visualization tool is provided to explore the synthetic nucleosome maps.

About

Summary

Generate synthetic nucleosome maps

Information Last Updated

Apr 22, 2025 at 15:28

License

Artistic-2.0

Total Downloads

40.5K

Platforms

Linux 64 Version: 1.8.0
macOS 64 Version: 1.8.0
noarch Version: 1.34.0