|
pysradb
|
public |
Python package for retrieving metadata and downloading datasets from SRA/ENA/GEO
|
2025-08-27 |
|
jcvi
|
public |
Python utility libraries on genome assembly, annotation, and comparative genomics.
|
2025-08-27 |
|
seismic-rna
|
public |
SEISMIC-RNA software by the Rouskin Lab.
|
2025-08-26 |
|
cagecleaner
|
public |
Genomic redundancy removal tool for cblaster hit sets.
|
2025-08-26 |
|
probe
|
public |
Evaluate and visualize protein interatomic packing
|
2025-08-26 |
|
pyani-plus
|
public |
Whole-genome classification of microbes using Average Nucleotide Identity and similar methods.
|
2025-08-26 |
|
cats-rb
|
public |
Reference-based transcriptome assembly quality assessment tool.
|
2025-08-25 |
|
cats-rf
|
public |
Reference-free transcriptome assembly quality assessment tool.
|
2025-08-25 |
|
alignoth
|
public |
A tool for creating alignment plots from bam files.
|
2025-08-25 |
|
perl-minion
|
public |
Job queue
|
2025-08-25 |
|
kmercamel
|
public |
KmerCamel🐫 - compressing k-mer sets using masked superstrings.
|
2025-08-25 |
|
pgscatalog-utils
|
public |
Utilities for working with PGS Catalog API and scoring files.
|
2025-08-25 |
|
openms
|
public |
OpenMS is an open-source software C++ library for LC-MS data management and analyses.
|
2025-08-24 |
|
libopenms
|
public |
OpenMS is an open-source software C++ library for LC-MS data management and analyses.
|
2025-08-24 |
|
openms-thirdparty
|
public |
OpenMS is an open-source software C++ library for LC-MS data management and analyses.
|
2025-08-24 |
|
porechop_abi
|
public |
Adapter inferrence and removal of Oxford Nanopore reads
|
2025-08-23 |
|
enhjoerning
|
public |
A tool for computing statistics on short read alignments.
|
2025-08-22 |
|
chromsize
|
public |
just get your chrom sizes
|
2025-08-22 |
|
r-azimuth
|
public |
Azimuth is a Shiny app demonstrating a query-reference mapping algorithm for single-cell data.
|
2025-08-22 |
|
r-seurat-data
|
public |
Single cell RNA sequencing datasets can be large, consisting of matrices that contain expression data for several thousand features across several thousand cells. This package is designed to easily install, manage, and learn about various single-cell datasets, provided Seurat objects and distributed as independent packages.
|
2025-08-22 |
|
eviann
|
public |
Evidence-based eukaryotic genome annotation software.
|
2025-08-22 |
|
r-seurat-disk
|
public |
The h5Seurat file format is specifically designed for the storage and analysis of multi-modal single-cell and spatially-resolved expression experiments, for example, from CITE-seq or 10X Visium technologies. It holds all molecular information and associated metadata, including (for example) nearest-neighbor graphs, dimensional reduction information, spatial coordinates and image data, and cluster labels. We also support rapid and on-disk conversion between h5Seurat and AnnData objects, with the goal of enhancing interoperability between Seurat and Scanpy.
|
2025-08-22 |
|
bioconductor-tfbstools
|
public |
Software Package for Transcription Factor Binding Site (TFBS) Analysis.
|
2025-08-22 |
|
svclone
|
public |
Computational method for inferring cancer cell fraction of tumour SVs from WGS.
|
2025-08-22 |
|
delve-bio
|
public |
A variant caller for mixed infections
|
2025-08-22 |
