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mdasim
|
public |
This is MDAsim 2+, a tool to simulate whole genome amplification of a DNA sequence with multiple displacement amplification. A citation for this version will be provided when available. MDAsim 2+ extends MDAsim 1.2, so please also always cite: Tagliavi Z, Draghici S. MDAsim: A multiple displacement amplification simulator. 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). 2012. pp. 1–4. doi:10.1109/BIBM.2012.6392622
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2025-08-16 |
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esme_netcdf-fortran_mvapich_4_0_ofi
|
public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-08-16 |
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perl-extutils-cppguess
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public |
Guess C++ compiler and flags.
|
2025-08-16 |
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esme_pnetcdf_mvapich_4_0_ofi
|
public |
PnetCDF - Parallel netCDF
|
2025-08-16 |
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arvados-cwl-runner
|
public |
Arvados Common Workflow Language runner.
|
2025-08-16 |
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perl-pegex
|
public |
Pegex Grammar for the Pegex Grammar Language.
|
2025-08-16 |
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crunchstat-summary
|
public |
Arvados crunchstat-summary reads crunch log files and summarizes resource usage.
|
2025-08-15 |
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homopolish
|
public |
High-quality Nanopore-only genome polisher.
|
2025-08-15 |
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perl-set-intervaltree
|
public |
An interval tree implementation in PERL.
|
2025-08-15 |
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vcf-reformatter
|
public |
Fast VCF file parser and reformatter with VEP and SnpEff annotation support
|
2025-08-15 |
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deacon
|
public |
Fast alignment-free sequence filter
|
2025-08-15 |
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hyperloglog
|
public |
HyperLogLog cardinality counter.
|
2025-08-15 |
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unifrac-binaries
|
public |
Fast phylogenetic diversity calculations
|
2025-08-15 |
|
fgbio
|
public |
A set of tools for working with genomic and high throughput sequencing data, including UMIs
|
2025-08-15 |
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fgbio-minimal
|
public |
A set of tools for working with genomic and high throughput sequencing data, including UMIs
|
2025-08-15 |
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bioconda-utils
|
public |
Utilities for building and managing bioconda recipes.
|
2025-08-15 |
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perl-libwww-perl
|
public |
The World-Wide Web library for Perl.
|
2025-08-15 |
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perl-http-cookiejar-lwp
|
public |
A minimalist HTTP user agent cookie jar.
|
2025-08-15 |
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perl-term-progressbar
|
public |
Provide a progress meter on a standard terminal.
|
2025-08-15 |
|
perl-xxx
|
public |
See Your Data in the Nude.
|
2025-08-15 |
|
perl-yaml-pp
|
public |
YAML 1.2 Processor
|
2025-08-15 |
|
perl-forks
|
public |
drop-in replacement for Perl threads using fork()
|
2025-08-15 |
|
perl-autodie
|
public |
Replace functions with ones that succeed or die with lexical scope.
|
2025-08-15 |
|
perl-dbd-pg
|
public |
DBI PostgreSQL interface
|
2025-08-15 |
|
perl-acme-damn
|
public |
'Unbless' Perl objects.
|
2025-08-15 |
