|
perl-dbd-mysql
|
public |
A MySQL driver for the Perl5 Database Interface (DBI).
|
2025-08-15 |
|
perl-sereal-encoder
|
public |
Fast, compact, powerful binary serialization.
|
2025-08-15 |
|
perl-sereal-decoder
|
public |
Fast, compact, powerful binary deserialization.
|
2025-08-15 |
|
filtlong
|
public |
Filtlong is a tool for filtering long reads. It can take a set of long reads and produce a smaller, better subset. It uses both read length (longer is better) and read identity (higher is better) when choosing which reads pass the filter.
|
2025-08-15 |
|
seqforge
|
public |
SeqForge: A genomics toolkit for FASTA processing, BLAST orchestration, and motif mining.
|
2025-08-15 |
|
auspice
|
public |
Auspice is an open-source interactive tool for visualising phylogenomic data
|
2025-08-15 |
|
revbayes
|
public |
Bayesian Phylogenetic Inference Using Graphical Models and an Interactive Model-Specification Language.
|
2025-08-15 |
|
augur
|
public |
Process pathogen genome data for the Nextstrain platform.
|
2025-08-14 |
|
virulign
|
public |
VIRULIGN is a tool for codon-correct pairwise alignments, with an augmented functionality to annotate the alignment according the positions of the proteins.
|
2025-08-14 |
|
r-recetox-aplcms
|
public |
apLCMS is a software which generates a feature table from a batch of LC/MS spectra. A modified fork of the original apLCMS by Tianwei Yu.
|
2025-08-14 |
|
drhip
|
public |
DRHIP - Data Reduction for HyPhy with Inference Processing
|
2025-08-14 |
|
assembly_finder
|
public |
Snakemake-powered cli pipeline to download genomes with NCBI datasets
|
2025-08-14 |
|
scirpy
|
public |
A Scanpy extension for analyzing single-cell T-cell and B-cell receptor (TCR/BCR) sequencing data.
|
2025-08-14 |
|
flexiplex
|
public |
flexiplex: the flexible demultiplexer (filter barcodes by whitelist and inflection point)
|
2025-08-14 |
|
novoloci
|
public |
Haplotype-aware assembler for complex regions and small genomes (ONT/HiFi).
|
2025-08-14 |
|
esme_pio_mvapich_4_0_ofi
|
public |
ParallelIO - High-level parallel I/O library
|
2025-08-14 |
|
esme_hdf5_mvapich_4_0_ofi
|
public |
HDF5 - Hierarchical Data Format 5
|
2025-08-14 |
|
esme_mvapich_4_0_ofi
|
public |
Earth System Modelling Environment (ESME) - A bundle for scientific computing packages for climate modelling with MPI support.
|
2025-08-14 |
|
apscale
|
public |
Advanced Pipeline for Simple yet Comprehensive AnaLysEs of DNA metabarcoding data.
|
2025-08-14 |
|
esme_esmf_mvapich_4_0_ofi
|
public |
ESMF - Earth System Modeling Framework
|
2025-08-14 |
|
esme_netcdf-c_mvapich_4_0_ofi
|
public |
NetCDF-C - netCDF interface for C
|
2025-08-14 |
|
commec
|
public |
commec: a free, open-source, globally available tool for DNA sequence screening
|
2025-08-14 |
|
pybdei
|
public |
Maximum likelihood estimation of Birth-Death Exposed-Infectious (BDEI) epidemiological model parameters from phylogenetic trees.
|
2025-08-14 |
|
selene-sdk
|
public |
Framework for developing sequence-level deep learning networks.
|
2025-08-14 |
|
pytabix
|
public |
Fast random access to sorted files compressed with bgzip and indexed by tabix.
|
2025-08-14 |
