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biocantor
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public |
Coordinate Maniuplation and Genome Annotation Data Model
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2025-08-18 |
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perl-sys-info-driver-linux
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public |
Linux driver for Sys::Info
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2025-08-18 |
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mzmine
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public |
Integrative analysis of multimodal mass spectrometry data.
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2025-08-18 |
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clumppling
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public |
Cluster matching and permutation program with integer linear programming.
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2025-08-18 |
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kractor
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public |
Rapidly extract reads from a FASTQ file based on taxonomic classification via Kraken2.
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2025-08-18 |
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sunbeamlib
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public |
A robust, extensible metagenomic sequencing pipeline.
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2025-08-18 |
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rdrpcatch
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public |
RNA virus RdRp sequence scanner.
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2025-08-18 |
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afragmenter
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public |
Schema-free, tunable protein domain segmentation tool for AlphaFold structures
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2025-08-18 |
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aardvark
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public |
A tool for sniffing out the differences in vari-Ants
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2025-08-18 |
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vg
|
public |
Variation graph data structures, interchange formats, alignment, genotyping, and variant calling methods
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2025-08-18 |
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planemo
|
public |
Command-line utilities to assist in building tools for the Galaxy project (https://galaxyproject.org).
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2025-08-18 |
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accusnv
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public |
High-accuracy SNV calling for bacterial isolates using AccuSNV.
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2025-08-18 |
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matam
|
public |
MATAM is a software dedicated to the fast and accurate targeted assembly of short reads.
|
2025-08-16 |
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intarna
|
public |
Efficient RNA-RNA interaction prediction incorporating seeding and accessibility of interacting sites
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2025-08-16 |
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mdasim
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public |
This is MDAsim 2+, a tool to simulate whole genome amplification of a DNA sequence with multiple displacement amplification. A citation for this version will be provided when available. MDAsim 2+ extends MDAsim 1.2, so please also always cite: Tagliavi Z, Draghici S. MDAsim: A multiple displacement amplification simulator. 2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM). 2012. pp. 1–4. doi:10.1109/BIBM.2012.6392622
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2025-08-16 |
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esme_netcdf-fortran_mvapich_4_0_ofi
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public |
NetCDF-Fortran - netCDF interface for Fortran
|
2025-08-16 |
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perl-extutils-cppguess
|
public |
Guess C++ compiler and flags.
|
2025-08-16 |
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esme_pnetcdf_mvapich_4_0_ofi
|
public |
PnetCDF - Parallel netCDF
|
2025-08-16 |
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arvados-cwl-runner
|
public |
Arvados Common Workflow Language runner.
|
2025-08-16 |
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perl-pegex
|
public |
Pegex Grammar for the Pegex Grammar Language.
|
2025-08-16 |
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crunchstat-summary
|
public |
Arvados crunchstat-summary reads crunch log files and summarizes resource usage.
|
2025-08-15 |
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homopolish
|
public |
High-quality Nanopore-only genome polisher.
|
2025-08-15 |
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perl-set-intervaltree
|
public |
An interval tree implementation in PERL.
|
2025-08-15 |
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vcf-reformatter
|
public |
Fast VCF file parser and reformatter with VEP and SnpEff annotation support
|
2025-08-15 |
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deacon
|
public |
Fast alignment-free sequence filter
|
2025-08-15 |
