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bioconductor-sevenbridges
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public |
Seven Bridges Platform API Client and Common Workflow Language Tool Builder in R
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2025-04-22 |
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r-jackstraw
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public |
Test for association between the observed data and their systematic patterns of variations. Systematic patterns may be captured by latent variables using principal component analysis (PCA), factor analysis (FA), and related methods. The jackstraw enables statistical testing for association between observed variables and latent variables, as captured by PCs or other estimates. Similarly, unsupervised clustering, such as K-means clustering, partition around medoids (PAM), and others, finds subpopulations among the observed variables. The jackstraw estimates statistical significance of cluster membership, including unsupervised evaluation of cell identities in single cell RNA-seq. P-values and posterior probabilities allows one to rigorously evaluate the strength of cluster membership assignments.
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2025-04-22 |
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r-enrichr
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public |
Provides an R interface to all 'Enrichr' databases, a web-based tool for analysing gene sets and returns any enrichment of common annotated biological functions. <http://amp.pharm.mssm.edu/Enrichr/>.
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2025-04-22 |
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r-clvalid
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public |
Statistical and biological validation of clustering results.
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2025-04-22 |
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bioconductor-zebrafishrnaseq
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public |
Zebrafish RNA-Seq Experimental Data from Ferreira et al. (2014)
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2025-04-22 |
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bioconductor-ygs98frmavecs
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public |
This package was created by frmaTools version 1.19.3 and hgu133ahsentrezgcdf version 19.0.0.
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2025-04-22 |
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bioconductor-yeastrnaseq
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public |
Yeast RNA-Seq Experimental Data from Lee et al. 2008
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2025-04-22 |
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bioconductor-yeastnagalakshmi
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public |
Yeast genome RNA sequencing data based on Nagalakshmi et. al.
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2025-04-22 |
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bioconductor-yeastgsdata
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public |
Yeast Gold Standard Data
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2025-04-22 |
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bioconductor-wes.1kg.wugsc
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public |
Whole Exome Sequencing (WES) of chromosome 22 401st to 500th exon from the 1000 Genomes (1KG) Project by the Washington University Genome Sequencing Center (WUGSC).
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2025-04-22 |
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bioconductor-wavetilingdata
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public |
waveTiling Example Data
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2025-04-22 |
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bioconductor-vulcandata
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public |
VirtUaL ChIP-Seq data Analysis using Networks, dummy dataset
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2025-04-22 |
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bioconductor-typeinfo
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public |
Optional Type Specification Prototype
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2025-04-22 |
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bioconductor-tximportdata
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public |
tximportData
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2025-04-22 |
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bioconductor-tofsimsdata
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public |
Import, process and analysis of ToF-SIMS imaging data
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2025-04-22 |
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bioconductor-tissuetreg
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public |
TWGBS and RNA-seq data from tissue T regulatory cells from mice
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2025-04-22 |
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bioconductor-timescape
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public |
Patient Clonal Timescapes
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2025-04-22 |
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bioconductor-timerquant
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public |
Timer Quantification
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2025-04-22 |
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bioconductor-tfutils
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public |
TFutils
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2025-04-22 |
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bioconductor-tcgamethylation450k
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public |
The Cancer Genome Atlas Illumina 450k methylation example data
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2025-04-22 |
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bioconductor-targetsearchdata
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public |
Example GC-MS data for TargetSearch Package
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2025-04-22 |
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bioconductor-targetscoredata
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public |
TargetScoreData
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2025-04-22 |
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bioconductor-swfdr
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public |
Estimation of the science-wise false discovery rate and the false discovery rate conditional on covariates
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2025-04-22 |
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bioconductor-stjudem
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public |
Microarray Data from Yeoh et al. in MACAT format
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2025-04-22 |
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bioconductor-sparsenetgls
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public |
Using Gaussian graphical structue learning estimation in generalized least squared regression for multivariate normal regression
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2025-04-22 |
