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mglex
|
public |
MGLEX - MetaGenome Likelihood EXtractor
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2025-04-22 |
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uropa
|
public |
UROPA (Universal RObust Peak Annotator) is a command line based tool, intended for genomic region annotation from e.g. peak calling.
It detects the most appropriate annotation by taking parameters such as feature type, anchor, direction and strand into account.
Furthermore, it allows filtering for GTF attribute values, e.g. protein_coding.
|
2025-04-22 |
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hclust2
|
public |
hclust2 is a handy tool for plotting heat-maps
|
2025-04-22 |
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qtip
|
public |
A tandem simulation approach for accurately predicting read alignment
mapping qualities.
|
2025-04-22 |
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shovill
|
public |
Microbial assembly pipeline for Illumina paired-end reads
|
2025-04-22 |
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riboseed
|
public |
riboSeed: assemble across rDNA regions
|
2025-04-22 |
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disty
|
public |
Disty McMatrixface - compute a distance matrix from a core genome alignment file.
|
2025-04-22 |
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translatorx
|
public |
Multiple alignment of nucleotide sequences guided by amino acid information
|
2025-04-22 |
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irida-linker
|
public |
The NGS Archive Linker is a Perl script used to generate a structure of links for files stored in the IRIDA platform.
|
2025-04-22 |
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bioconductor-beat
|
public |
BEAT - BS-Seq Epimutation Analysis Toolkit
|
2025-04-22 |
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bioconductor-bgafun
|
public |
BGAfun A method to identify specifity determining residues in protein families
|
2025-04-22 |
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bioconductor-bhc
|
public |
Bayesian Hierarchical Clustering
|
2025-04-22 |
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bioconductor-bgmix
|
public |
Bayesian models for differential gene expression
|
2025-04-22 |
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bioconductor-bgeedb
|
public |
Annotation and gene expression data retrieval from Bgee database. TopAnat, an anatomical entities Enrichment Analysis tool for UBERON ontology
|
2025-04-22 |
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bioconductor-beadarraysnp
|
public |
Normalization and reporting of Illumina SNP bead arrays
|
2025-04-22 |
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bioconductor-beclear
|
public |
Correction of batch effects in DNA methylation data
|
2025-04-22 |
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bioconductor-arraytools
|
public |
geneChip Analysis Package
|
2025-04-22 |
|
bioconductor-annotationfuncs
|
public |
Annotation translation functions
|
2025-04-22 |
|
bioconductor-aseb
|
public |
Predict Acetylated Lysine Sites
|
2025-04-22 |
|
bioconductor-anota
|
public |
ANalysis Of Translational Activity (ANOTA).
|
2025-04-22 |
|
bioconductor-asafe
|
public |
Ancestry Specific Allele Frequency Estimation
|
2025-04-22 |
|
bioconductor-atlasrdf
|
public |
Query the Gene Expression Atlas RDF data at the European Bioinformatics Institute using genes, experimental factors (such as disease, cell type, compound treatments), pathways and proteins. Also contains a function to perform an enrichment of your gene list across Experimental Factor Ontology (EFO) using the Atlas background set.
|
2025-04-22 |
|
bioconductor-arrayquality
|
public |
Assessing array quality on spotted arrays
|
2025-04-22 |
|
bioconductor-antiprofiles
|
public |
Implementation of gene expression anti-profiles
|
2025-04-22 |
|
bioconductor-basespacer
|
public |
R SDK for BaseSpace RESTful API
|
2025-04-22 |
