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apoc
|
public |
Large-scale structural comparison of protein pockets
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2025-04-22 |
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perl-bio-eutilities
|
public |
Webagent which interacts with and retrieves data from NCBI eUtils.
|
2025-04-22 |
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perl-tie-log4perl
|
public |
Tie a filehandle to log via Log4perl
|
2025-04-22 |
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intervene
|
public |
A tool for intersection of multiple gene or genomic region sets and visualization as venn diagrams, UpSet plots or pariwaise heatmaps
|
2025-04-22 |
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hlaprofiler
|
public |
HLAProfiler uses k-mer profiles to predict HLA types from paired-end RNA-seq data.
|
2025-04-22 |
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xxhash
|
public |
Python binding for xxHash
|
2025-04-22 |
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xdg
|
public |
Variables defined by the XDG Base Directory Specification
|
2025-04-22 |
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netreg
|
public |
netReg fits linear regression models using network-penalization.
|
2025-04-22 |
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arb-bio
|
public |
ARB 6 Sequence Analysis Suite
|
2025-04-22 |
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phyml
|
public |
Phylogenetic estimation using (Maximum) Likelihood
|
2025-04-22 |
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indelfixer
|
public |
A sensitive aligner for 454, Illumina and PacBio data, employing a full Smith-Waterman alignment against a reference.
|
2025-04-22 |
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peakachu
|
public |
Peak calling tool for CLIP-seq data.
|
2025-04-22 |
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cmv
|
public |
A collection of tools for the visualisation of Hidden Markov Models (HMMV) and RNA-family models (CMV).
|
2025-04-22 |
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mrbayes
|
public |
Bayesian Inference of Phylogeny
|
2025-04-22 |
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r-rematch2
|
public |
Wrappers on 'regexpr' and 'gregexpr' to return the match results in tidy data frames.
|
2025-04-22 |
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json_collect_data_source
|
public |
This tool is able to receive multiple datasets (optionally with their metadata) in a single query. As an extension of the galaxy-json-data-source tool (https://github.com/mdshw5/galaxy-json-data-source), it allows to handle archives (gz, bz2, tar, and zip) organizing their content in a collection.
|
2025-04-22 |
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bioconductor-risa
|
public |
Converting experimental metadata from ISA-tab into Bioconductor data structures
|
2025-04-22 |
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bioconductor-biocviews
|
public |
Categorized views of R package repositories
|
2025-04-22 |
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w4mclstrpeakpics
|
public |
Visualize W4M sample-cluster peaks - Produce a figure to assess the similarities and differences among peaks in a cluster of samples using XCMS-preprocessed data files as input. MIT Licence allows redistribution.
|
2025-04-22 |
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fusepy
|
public |
Simple ctypes bindings for FUSE
|
2025-04-22 |
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r-microseq
|
public |
Basic functions for microbial sequence data analysis.
|
2025-04-22 |
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bioconductor-profia
|
public |
Preprocessing of FIA-HRMS data
|
2025-04-22 |
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r-maxlik
|
public |
Functions for Maximum Likelihood (ML) estimation and non-linear optimization, and related tools. It includes a unified way to call different optimizers, and classes and methods to handle the results from the ML viewpoint. It also includes a number of convenience tools for testing and developing your own models.
|
2025-04-22 |
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gdsctools
|
public |
Set of tools and pipelines to analyse GDSC data (cancerrxgene.org)
|
2025-04-22 |
|
r-misctools
|
public |
Miscellaneous small tools and utilities. Many of them facilitate the work with matrices, e.g. inserting rows or columns, creating symmetric matrices, or checking for semidefiniteness. Other tools facilitate the work with regression models, e.g. extracting the standard errors, obtaining the number of (estimated) parameters, or calculating R-squared values.
|
2025-04-22 |
