bioconda / packages / bioconductor-risa 1.30.0

Converting experimental metadata from ISA-tab into Bioconductor data structures

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.30.0
  • osx-64  v1.30.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-risa
conda install -c bioconda/label/gcc7 bioconductor-risa
conda install -c bioconda/label/cf201901 bioconductor-risa

Description

The Investigation / Study / Assay (ISA) tab-delimited format is a general purpose framework with which to collect and communicate complex metadata (i.e. sample characteristics, technologies used, type of measurements made) from experiments employing a combination of technologies, spanning from traditional approaches to high-throughput techniques. Risa allows to access metadata/data in ISA-Tab format and build Bioconductor data structures. Currently, data generated from microarray, flow cytometry and metabolomics-based (i.e. mass spectrometry) assays are supported. The package is extendable and efforts are undergoing to support metadata associated to proteomics assays.

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