| Package Name | Access | Summary | Updated |
|---|---|---|---|
| bioconductor-plier | public | Implements the Affymetrix PLIER algorithm | 2025-04-22 |
| bioconductor-plgem | public | Detect differential expression in microarray and proteomics datasets with the Power Law Global Error Model (PLGEM) | 2025-04-22 |
| bioconductor-pkgdeptools | public | Package Dependency Tools | 2025-04-22 |
| bioconductor-pickgene | public | Adaptive Gene Picking for Microarray Expression Data Analysis | 2025-04-22 |
| bioconductor-pepxmltab | public | Parsing pepXML files and filter based on peptide FDR. | 2025-04-22 |
| bioconductor-pepstat | public | Statistical analysis of peptide microarrays | 2025-04-22 |
| bioconductor-peca | public | Probe-level Expression Change Averaging | 2025-04-22 |
| bioconductor-pcan | public | Phenotype Consensus ANalysis (PCAN) | 2025-04-22 |
| bioconductor-pathnet | public | An R package for pathway analysis using topological information | 2025-04-22 |
| bioconductor-path2ppi | public | Prediction of pathway-related protein-protein interaction networks | 2025-04-22 |
| bioconductor-parody | public | Parametric And Resistant Outlier DYtection | 2025-04-22 |
| bioconductor-papi | public | Predict metabolic pathway activity based on metabolomics data | 2025-04-22 |
| bioconductor-panp | public | Presence-Absence Calls from Negative Strand Matching Probesets | 2025-04-22 |
| bioconductor-pannbuilder | public | Processing annotation data from public data repositories and building protein-centric annotation data packages. | 2025-04-22 |
| bioconductor-paircompviz | public | Multiple comparison test visualization | 2025-04-22 |
| bioconductor-outlierd | public | Outlier detection using quantile regression on the M-A scatterplots of high-throughput data | 2025-04-22 |
| bioconductor-otubase | public | Provides structure and functions for the analysis of OTU data | 2025-04-22 |
| bioconductor-oscope | public | Oscope - A statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-seq | 2025-04-22 |
| bioconductor-osat | public | OSAT: Optimal Sample Assignment Tool | 2025-04-22 |
| bioconductor-omiccircos | public | High-quality circular visualization of omics data | 2025-04-22 |
| bioconductor-omicade4 | public | Multiple co-inertia analysis of omics datasets | 2025-04-22 |
| bioconductor-olin | public | Optimized local intensity-dependent normalisation of two-color microarrays | 2025-04-22 |
| bioconductor-ogsa | public | Outlier Gene Set Analysis | 2025-04-22 |
| bioconductor-occugene | public | Functions for Multinomial Occupancy Distribution | 2025-04-22 |
| bioconductor-nudge | public | Package for normalizing microarray data in single and multiple replicate experiments and fitting a normal-uniform mixture to detect differentially expressed genes in the cases where the two samples are being compared directly or indirectly (via a common reference sample) | 2025-04-22 |
