About Anaconda Help Download Anaconda

bioconda / packages

Package Name Access Summary Updated
sed public sed (stream editor) 2025-04-22
r-fdrtool public Estimates both tail area-based false discovery rates (Fdr) as well as local false discovery rates (fdr) for a variety of null models (p-values, z-scores, correlation coefficients, t-scores). The proportion of null values and the parameters of the null distribution are adaptively estimated from the data. In addition, the package contains functions for non-parametric density estimation (Grenander estimator), for monotone regression (isotonic regression and antitonic regression with weights), for computing the greatest convex minorant (GCM) and the least concave majorant (LCM), for the half-normal and correlation distributions, and for computing empirical higher criticism (HC) scores and the corresponding decision threshold. 2025-04-22
perl-text-soundex public Implementation of the soundex algorithm. 2025-04-22
rmblast public RMBlast is a RepeatMasker compatible version of the standard NCBI BLAST+ suite. 2025-04-22
hicexplorer public Set of programs to process, analyze and visualize Hi-C and capture Hi-C data 2025-04-22
bioconductor-mzr public parser for netCDF, mzXML and mzML and mzIdentML files (mass spectrometry data) 2025-04-22
gawk public GNU awk 2025-04-22
poretools public poretools: a toolkit for working with nanopore sequencing data from Oxford Nanopore 2025-04-22
deeptools public A set of user-friendly tools for normalization and visualzation of deep-sequencing data 2025-04-22
snippy public Rapid bacterial SNP calling and core genome alignments 2025-04-22
libmagic public Implementation of the file(1) command 2025-04-22
setuptools_cython public Cython setuptools integration 2025-04-22
bioconductor-dexseq public Inference of differential exon usage in RNA-Seq 2025-04-22
tabulate public Pretty-print tabular data 2025-04-22
perl-time-hires public High resolution alarm, sleep, gettimeofday, interval timers 2025-04-22
perl-encode-locale public Determine the locale encoding 2025-04-22
mummer public MUMmer is a system for rapidly aligning entire genomes 2025-04-22
lofreq public A fast and sensitive variant-caller for inferring SNVs and indels from next-generation sequencing data 2025-04-22
perl-gd public Perl interface to the gd2 graphics library 2025-04-22
bioconductor-rtracklayer public R interface to genome annotation files and the UCSC genome browser 2025-04-22
bioconductor-deseq2 public Differential gene expression analysis based on the negative binomial distribution 2025-04-22
bioconductor-rhdf5 public R Interface to HDF5 2025-04-22
bioconductor-genomicranges public Representation and manipulation of genomic intervals 2025-04-22
bioconductor-genomeinfodb public Utilities for manipulating chromosome names, including modifying them to follow a particular naming style 2025-04-22
bioconductor-xvector public Foundation of external vector representation and manipulation in Bioconductor 2025-04-22

© 2025 Anaconda, Inc. All Rights Reserved. (v4.2.2) Legal | Privacy Policy