bioconda / packages / bioconductor-dexseq 1.34.0

Inference of differential exon usage in RNA-Seq

Installers

Info: This package contains files in non-standard labels.

conda install

  • linux-64  v1.26.0
  • osx-64  v1.26.0
  • noarch  v1.34.0
To install this package with conda run one of the following:
conda install -c bioconda bioconductor-dexseq
conda install -c bioconda/label/gcc7 bioconductor-dexseq
conda install -c bioconda/label/broken bioconductor-dexseq
conda install -c bioconda/label/cf201901 bioconductor-dexseq

Description

The package is focused on finding differential exon usage using RNA-seq exon counts between samples with different experimental designs. It provides functions that allows the user to make the necessary statistical tests based on a model that uses the negative binomial distribution to estimate the variance between biological replicates and generalized linear models for testing. The package also provides functions for the visualization and exploration of the results.

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