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bioconductor-rtracklayer

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R interface to genome annotation files and the UCSC genome browser

Installation

To install this package, run one of the following:

Conda
$conda install bioconda::bioconductor-rtracklayer

Usage Tracking

1.66.0
1.62.0
1.60.0
1.58.0
1.54.0
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Downloads (Last 6 months): 0

Description

Extensible framework for interacting with multiple genome browsers (currently UCSC built-in) and manipulating annotation tracks in various formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit built-in). The user may export/import tracks to/from the supported browsers, as well as query and modify the browser state, such as the current viewport.

About

Summary

R interface to genome annotation files and the UCSC genome browser

Last Updated

Dec 22, 2024 at 00:49

License

Artistic-2.0 + file LICENSE

Total Downloads

504.5K

Supported Platforms

linux-64
macOS-64
linux-aarch64
macOS-arm64