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bioconductor-spectraql
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public |
MassQL support for Spectra
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2025-03-25 |
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bioconductor-pipets
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public |
Poisson Identification of PEaks from Term-Seq data
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2025-03-25 |
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bioconductor-brew3r.r
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public |
R package associated to BREW3R
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2025-03-25 |
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bioconductor-scoup
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public |
Simulate Codons with Darwinian Selection Modelled as an OU Process
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2025-03-25 |
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tinker
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public |
The Tinker molecular modeling software is a complete and general package for molecular mechanics and dynamics, with some special features for biopolymers
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2025-03-25 |
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bioconductor-clustall
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public |
ClustAll: Data driven strategy to robustly identify stratification of patients within complex diseases
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2025-03-25 |
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amplicontyper
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public |
Tool for training model and classifying reads from environmental ONT amplicon sequencing.
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2025-03-25 |
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bioconductor-tidyflowcore
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public |
tidyFlowCore: Bringing flowCore to the tidyverse
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2025-03-25 |
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bioconductor-tidytof
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public |
Analyze High-dimensional Cytometry Data Using Tidy Data Principles
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2025-03-25 |
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allhic
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public |
Genome scaffolding based on HiC data in heterozygous and high ploidy genomes
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2025-03-25 |
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svseq2
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public |
An improved approach for accurate and efficient calling of structural variations with low-coverage sequence data
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2025-03-25 |
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bioconductor-dfplyr
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public |
A `DataFrame` (`S4Vectors`) backend for `dplyr`
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2025-03-25 |
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bioconductor-ucsc.utils
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public |
Low-level utilities to retrieve data from the UCSC Genome Browser
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2025-03-25 |
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bioconductor-bugphyzz
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public |
A harmonized data resource and software for enrichment analysis of microbial physiologies
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2025-03-25 |
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bioconductor-pedixplorer
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public |
Pedigree Functions
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2025-03-25 |
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chain2paf
|
public |
convert CHAIN format to PAF format
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2025-03-25 |
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echidna
|
public |
Mapping genotype to phenotype through joint probabilistic modeling of single-cell gene expression and chromosomal copy number variation.
|
2025-03-25 |
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mcscanx
|
public |
Multiple Collinearity Scan toolkit X version
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2025-03-25 |
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bioconductor-ath1121501frmavecs
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public |
Vectors used by frma for microarrays of type ath1121501
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2025-03-25 |
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smcpp
|
public |
SMC++ infers population history from whole-genome sequence data.
|
2025-03-25 |
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seshat
|
public |
Tools for programmatically annotating VCFs with the Seshat TP53 database.
|
2025-03-25 |
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paf2chain
|
public |
convert PAF format to CHAIN format
|
2025-03-25 |
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softsv
|
public |
SoftSV is a tool for the detection of small and large deletions, inversions, tandem duplications and translocations from paired-end sequencing data.
|
2025-03-25 |
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bioconductor-anvilaz
|
public |
R / Bioconductor Support for the AnVIL Azure Platform
|
2025-03-25 |
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bioconductor-anvilgcp
|
public |
The GCP R Client for the AnVIL
|
2025-03-25 |
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bioconductor-scmitomut
|
public |
Single-cell Mitochondrial Mutation Analysis Tool
|
2025-03-25 |
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bioconductor-alphamissenser
|
public |
Accessing AlphaMissense Data Resources in R
|
2025-03-25 |
|
bioconductor-koinar
|
public |
KoinaR - Remote machine learning inference using Koina
|
2025-03-25 |
|
bioconductor-spacemarkers
|
public |
Spatial Interaction Markers
|
2025-03-25 |
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bioconductor-tidysbml
|
public |
Extract SBML's data into dataframes
|
2025-03-25 |
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bioconductor-hubmapr
|
public |
Interface to 'HuBMAP'
|
2025-03-25 |
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bioconductor-seahtrue
|
public |
Seahtrue revives XF data for structured data analysis
|
2025-03-25 |
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bioconductor-biocroxytest
|
public |
Handle Long Tests in Bioconductor Packages
|
2025-03-25 |
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bioconductor-anvilbase
|
public |
Generic functions for interacting with the AnVIL ecosystem
|
2025-03-25 |
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bioconductor-gypsum
|
public |
Interface to the gypsum REST API
|
2025-03-25 |
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bioconductor-assorthead
|
public |
Assorted Header-Only C++ Libraries
|
2025-03-25 |
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bioconductor-shiny.gosling
|
public |
A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization for R and Shiny
|
2025-03-25 |
|
popins2
|
public |
Population-scale detection of non-reference sequence variants using colored de Bruijn Graphs
|
2025-03-25 |
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bindashtree
|
public |
bindashtree is a ultra-fast tool to build genome phylogenetic tree via Binwise Densified MinHash and Rapid Neighbor-joining
|
2025-03-25 |
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gpatch
|
public |
Starting with alignments of contigs to a reference genome, produce a chromosome-scale pseudoassembly by patching gaps between mapped contigs with sequences from the reference."
|
2025-03-25 |
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pseqsid
|
public |
Calculates pairwise sequence identity, similarity and normalized similarity
score of proteins in a multiple sequence alignment.
|
2025-03-25 |
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virdig
|
public |
A de novo transcriptome assembler for coronavirus.
|
2025-03-25 |
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equirep
|
public |
EquiRep is tool to identify tandem repeats.
|
2025-03-25 |
|
ibridges
|
public |
Package for accessing data and metadata on iRods servers.
|
2025-03-25 |
|
sylph-tax
|
public |
Integrating taxonomic information into the sylph metagenome profiler.
|
2025-03-25 |
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mmft
|
public |
Max's minimal fasta toolkit
|
2025-03-25 |
|
optilcms
|
public |
Pipeline for processing LC-MS raw data with optimized parameters.
|
2025-03-25 |
|
mm2plus
|
public |
Fast long-read mapper and whole-genome aligner (accelerated version of minimap2)
|
2025-03-25 |
|
phytop
|
public |
Phytop: A tool for visualizing and recognizing signals of incomplete lineage sorting and hybridization using species trees output from ASTRAL
|
2025-03-25 |
|
pyskani
|
public |
PyO3 bindings and Python interface to skani, a method for fast fast genomic identity calculation using sparse chaining.
|
2025-03-25 |
