nextclade
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement.
Installation
To install this package, run one of the following:
Try This Package Beta
Usage Tracking
3.25.0
3.24.0
3.23.0
3.22.0
3.21.2
5 / 8 versions selected
Downloads (Last 6 months): 0
About
Summary
Viral genome alignment, mutation calling, clade assignment, quality checks and phylogenetic placement.
Last Updated
Oct 14, 2026 at 00:38
License
MIT
Supported Platforms
linux-64
macOS-64
linux-aarch64
macOS-arm64
GitHub Repository
https://github.com/nextstrain/nextcladeDocumentation
https://docs.nextstrain.org/projects/nextclade/en/stable