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bioconda / packages

Package Name Access Summary Updated
treesimulator public Simulation of rooted phylogenetic trees under a given Multitype Birth–Death (MTBD) model. 2025-09-12
easypqp public EasyPQP: Simple library generation for OpenSWATH 2025-09-11
artic public ARTIC pipeline - a bioinformatics pipeline for working with virus sequencing data sequenced with nanopore. 2025-09-11
jbrowse2 public The JBrowse 2 Genome Browser 2025-09-11
pango-designation public Repository for suggesting new lineages that should be added to the current scheme. 2025-09-11
straglr public Short-tandem repeat genotyping using long reads 2025-09-10
tobias public Transcription factor Occupancy prediction By Investigation of ATAC-seq Signal. 2025-09-10
sequali public Fast sequencing quality metrics 2025-09-10
dfast public DDBJ Fast Annotation and Submission Tool - Prokaryotic genome annotation pipeline 2025-09-10
varpubs public Tool for finding PubMed evidence on genetic variants and generating LLM-based summaries 2025-09-10
dpcstruct public Unsupervised clustering algorithm for identifying and classifying protein domains based on structural similarity. 2025-09-10
tagra public TaGra: TAbular data preprocessing to GRAph representation. 2025-09-10
cdst public CoDing Sequence Typer (CDST): MD5 hash-based genome typing and clustering. 2025-09-10
alloshp public From mapped reads to Single Homeologous Polymorphisms (SHPs): pipeline for phylogenetic studies of allopolyploids 2025-09-10
lexicmap public efficient sequence alignment against millions of prokaryotic genomes 2025-09-10
neat public Toolset for generating synthethic FASTQ, VCF and BAM files. 2025-09-10
mity public Mity is a bioinformatic analysis pipeline designed to call mitochondrial SNV and INDEL variants from Whole Genome Sequencing (WGS) data. 2025-09-10
porechop_abi public Adapter inferrence and removal of Oxford Nanopore reads. 2025-09-10
marti public Metagenomic Analysis in Real Time 2025-09-10
gaftools public gaftools is a fast and comprehensive toolkit designed for processing pangenome alignments in GAF format 2025-09-10
gsmap public gsMap (genetically informed spatial mapping of cells for complex traits). 2025-09-10
metabolabpy public Python package to process 1D and 2D NMR spectroscopic data for metabolomics and tracer-based metabolism analysis. 2025-09-10
pegas public PeGAS is a Snakemake pipeline for genome analysis 2025-09-10
nanomotif public Identifying methlyation motifs in nanopore data 2025-09-10
perl-mce public Many-Core Engine for Perl providing parallel processing capabilities 2025-09-10

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