Mity | Anaconda.org

bioconda / packages / mity 1.1.0

0

Mity is a bioinformatic analysis pipeline designed to call mitochondrial SNV and INDEL variants from Whole Genome Sequencing (WGS) data.

License: MIT
Home: https://github.com/KCCG/mity
21 total downloads
Last upload: 9 days and 20 hours ago

Installers

noarch v1.1.0

conda install

To install this package run one of the following:
conda install bioconda::mity

Description

Mity can:

identify very low-heteroplasmy variants, even <1% heteroplasmy when there is sufficient read-depth (eg >1000x)
filter out common artefacts that arise from high-depth sequencing
easily integrate with existing nuclear DNA analysis pipelines (mity merge)
provide an annotated report, designed for clinicians and researchers to interrogate

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