mity
Mity is a bioinformatic analysis pipeline designed to call mitochondrial SNV and INDEL variants from Whole Genome Sequencing (WGS) data.
Mity is a bioinformatic analysis pipeline designed to call mitochondrial SNV and INDEL variants from Whole Genome Sequencing (WGS) data.
To install this package, run one of the following:
Mity can: - identify very low-heteroplasmy variants, even <1% heteroplasmy when there is sufficient read-depth (eg >1000x) - filter out common artefacts that arise from high-depth sequencing - easily integrate with existing nuclear DNA analysis pipelines (mity merge) - provide an annotated report, designed for clinicians and researchers to interrogate
Summary
Mity is a bioinformatic analysis pipeline designed to call mitochondrial SNV and INDEL variants from Whole Genome Sequencing (WGS) data.
Last Updated
Sep 10, 2025 at 04:45
License
MIT
Total Downloads
440
Supported Platforms
GitHub Repository
https://github.com/KCCG/mityDocumentation
https://github.com/KCCG/mity/blob/2.0.1/README.md