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Fast Rust-based quality control for high-throughput sequencing data

Installers

  • linux-aarch64 v0.1.0
  • linux-64 v0.1.0
  • osx-64 v0.1.0
  • osx-arm64 v0.1.0

conda install

To install this package run one of the following:
conda install bioconda::rastqc

Description

RastQC is a drop-in replacement for FastQC written in Rust. It implements all 12 FastQC modules with matching algorithms and output formats (HTML, fastqc_data.txt, ZIP, native MultiQC JSON). The streaming parallel pipeline runs 2-3x faster than FastQC on real sequencing data. For Oxford Nanopore data (Fast5 + POD5 readers and long-read modules), install the sibling package rastqc-nanopore.


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