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bioconda / packages / rastqc-nanopore 0.1.0

Fast Rust-based QC for Oxford Nanopore sequencing data (Fast5 + POD5)

Installers

  • linux-aarch64 v0.1.0
  • linux-64 v0.1.0
  • osx-64 v0.1.0
  • osx-arm64 v0.1.0

conda install

To install this package run one of the following:
conda install bioconda::rastqc-nanopore

Description

rastqc-nanopore is the long-read variant of RastQC. It adds Fast5 (HDF5) and POD5 (Arrow) readers for Oxford Nanopore data, plus 3 long-read modules (N50, quality-stratified length, homopolymer content) on top of the 12 standard FastQC modules. The binary is installed as rastqc-nanopore so this package can coexist with the core rastqc package in the same environment.


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