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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

Type Size Name Uploaded Downloads Labels
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_3.tar.bz2  5 years and 5 months ago 816 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_3.tar.bz2  5 years and 5 months ago 3220 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_2.tar.bz2  5 years and 8 months ago 210 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_2.tar.bz2  5 years and 8 months ago 364 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r351h29659fb_1.tar.bz2  6 years and 3 months ago 687 main gcc7
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h466af19_1.tar.bz2  6 years and 3 months ago 112 main gcc7
conda 1.6 MB | linux-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 6 months ago 736 main cf201901
conda 1.8 MB | linux-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 6 months ago 366 main cf201901
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  6 years and 6 months ago 292 main cf201901
conda 1.6 MB | osx-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  6 years and 6 months ago 356 main cf201901

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