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Facilitates easy manipulation of variant call format (VCF) data. Functions are provided to rapidly read from and write to VCF files. Once VCF data is read into R a parser function extracts matrices of data. This information can then be used for quality control or other purposes. Additional functions provide visualization of genomic data. Once processing is complete data may be written to a VCF file (*.vcf.gz). It also may be converted into other popular R objects (e.g., genlight, DNAbin). VcfR provides a link between VCF data and familiar R software.

Type Size Name Uploaded Downloads Labels
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_3.tar.bz2  6 years and 4 months ago 1027 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_3.tar.bz2  6 years and 4 months ago 3243 main
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r36hf99fc2c_2.tar.bz2  6 years and 6 months ago 236 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r36h0357c0b_2.tar.bz2  6 years and 6 months ago 457 main
conda 1.7 MB | linux-64/r-vcfr-1.8.0-r351h29659fb_1.tar.bz2  7 years and 2 months ago 767 main gcc7
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h466af19_1.tar.bz2  7 years and 2 months ago 137 main gcc7
conda 1.6 MB | linux-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  7 years and 4 months ago 812 main cf201901
conda 1.8 MB | linux-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  7 years and 4 months ago 437 main cf201901
conda 1.7 MB | osx-64/r-vcfr-1.8.0-r351h9d2a408_0.tar.bz2  7 years and 4 months ago 315 main cf201901
conda 1.6 MB | osx-64/r-vcfr-1.8.0-r341h9d2a408_0.tar.bz2  7 years and 4 months ago 381 main cf201901
conda 2.6 MB | osx-64/r-vcfr-1.5.0-r3.4.1_0.tar.bz2  8 years and 3 months ago 4412 main cf201901
conda 2.7 MB | linux-64/r-vcfr-1.5.0-r3.4.1_0.tar.bz2  8 years and 3 months ago 1164 main cf201901

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