bioconda / packages / r-txrevise 0.1

Construct custom transcript annotations for Salmon and kallisto


conda install

  • noarch  v0.1
To install this package with conda run:
conda install -c bioconda r-txrevise


txrevise R package provides utilites to pre-process Ensembl transcript annotations to quantify differences in transcript strucuture (alternative promoters, alternative splicing, alternative poly-adenylation) either between experimental conditions or genotypes (e.g. for transcript usage quntitative trait loci (tuQTL) mapping).

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