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bioconda / packages / r-sigminer

Genomic alterations including single nucleotide substitution, copy number alteration, etc. are the major force for cancer initialization and development. Due to the specificity of molecular lesions caused by genomic alterations, we can generate characteristic alteration spectra, called 'signature' (Wang, Shixiang, et al. (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff, et al. (2018) <DOI:10.1038/s41588-018-0179-8>). This package helps users to extract, analyze and visualize signatures from genomic alteration records, thus providing new insight into cancer study.

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Type Size Name Uploaded Downloads Labels
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h3f1888f_1.tar.bz2  9 months and 4 days ago 50 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_1.tar.bz2  9 months and 4 days ago 146 main
conda 4.6 MB | linux-aarch64/r-sigminer-2.3.1-r43hb19973c_1.tar.bz2  9 months and 4 days ago 47 main
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h71b3455_0.tar.bz2  10 months and 12 days ago 601 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_0.tar.bz2  10 months and 12 days ago 75 main
conda 4.2 MB | osx-64/r-sigminer-2.3.0-r43h71b3455_0.tar.bz2  1 year and 3 months ago 922 main
conda 4.2 MB | linux-64/r-sigminer-2.3.0-r43h21a89ab_0.tar.bz2  1 year and 3 months ago 107 main
conda 4.7 MB | osx-64/r-sigminer-2.2.2-r43h71b3455_0.tar.bz2  1 year and 7 months ago 1160 main
conda 4.7 MB | linux-64/r-sigminer-2.2.2-r43h21a89ab_0.tar.bz2  1 year and 7 months ago 106 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r43h21a89ab_2.tar.bz2  1 year and 8 months ago 100 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r43h71b3455_2.tar.bz2  1 year and 8 months ago 1220 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h71b3455_1.tar.bz2  1 year and 9 months ago 128 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42h21a89ab_1.tar.bz2  1 year and 9 months ago 124 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h71b3455_2.tar.bz2  1 year and 10 months ago 1312 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h63d8054_0.tar.bz2  1 year and 10 months ago 106 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42hecf12ef_0.tar.bz2  1 year and 10 months ago 142 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42h21a89ab_2.tar.bz2  1 year and 10 months ago 112 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42hecf12ef_1.tar.bz2  2 years and 4 months ago 150 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h63d8054_1.tar.bz2  2 years and 4 months ago 432 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r41h63d8054_0.tar.bz2  2 years and 4 months ago 53 main
conda 3.1 MB | linux-64/r-sigminer-2.1.9-r41hecf12ef_0.tar.bz2  2 years and 4 months ago 146 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r42h63d8054_1.tar.bz2  2 years and 5 months ago 1722 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r42hecf12ef_1.tar.bz2  2 years and 5 months ago 142 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r41h63d8054_0.tar.bz2  2 years and 5 months ago 78 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r41hecf12ef_0.tar.bz2  2 years and 5 months ago 134 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_1.tar.bz2  2 years and 6 months ago 1808 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_1.tar.bz2  2 years and 6 months ago 161 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_1.tar.bz2  2 years and 7 months ago 1812 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_0.tar.bz2  2 years and 7 months ago 61 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_0.tar.bz2  2 years and 7 months ago 149 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_1.tar.bz2  2 years and 7 months ago 154 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_0.tar.bz2  2 years and 7 months ago 77 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_0.tar.bz2  2 years and 7 months ago 153 main
conda 3.4 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_1.tar.bz2  2 years and 8 months ago 165 main
conda 3.4 MB | osx-64/r-sigminer-2.1.5-r41h4277420_0.tar.bz2  2 years and 9 months ago 1899 main
conda 3.3 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_0.tar.bz2  2 years and 9 months ago 159 main
conda 2.9 MB | osx-64/r-sigminer-2.1.4-r41h4277420_0.tar.bz2  2 years and 11 months ago 2027 main
conda 2.9 MB | linux-64/r-sigminer-2.1.4-r41hecf12ef_0.tar.bz2  2 years and 11 months ago 171 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_1.tar.bz2  3 years and 24 days ago 2126 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_1.tar.bz2  3 years and 24 days ago 169 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_0.tar.bz2  3 years and 25 days ago 168 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_0.tar.bz2  3 years and 25 days ago 49 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41h4277420_1.tar.bz2  3 years and 1 month ago 58 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41hecf12ef_1.tar.bz2  3 years and 1 month ago 175 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41hdb58930_0.tar.bz2  3 years and 3 months ago 2278 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41h52a8340_0.tar.bz2  3 years and 3 months ago 168 main
conda 3.2 MB | osx-64/r-sigminer-2.1.1-r41hdb58930_0.tar.bz2  3 years and 5 months ago 2386 main
conda 3.2 MB | linux-64/r-sigminer-2.1.1-r41h52a8340_0.tar.bz2  3 years and 5 months ago 195 main
conda 4.9 MB | osx-64/r-sigminer-2.1.0-r41hdb58930_0.tar.bz2  3 years and 6 months ago 2453 main
conda 4.9 MB | linux-64/r-sigminer-2.1.0-r41h52a8340_0.tar.bz2  3 years and 6 months ago 197 main
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