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bioconda / packages / r-sigminer

Genomic alterations including single nucleotide substitution, copy number alteration, etc. are the major force for cancer initialization and development. Due to the specificity of molecular lesions caused by genomic alterations, we can generate characteristic alteration spectra, called 'signature' (Wang, Shixiang, et al. (2020) <DOI:10.1101/2020.04.27.20082404> & Alexandrov, Ludmil B., et al. (2020) <DOI:10.1038/s41586-020-1943-3> & Macintyre, Geoff, et al. (2018) <DOI:10.1038/s41588-018-0179-8>). This package helps users to extract, analyze and visualize signatures from genomic alteration records, thus providing new insight into cancer study.

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Type Size Name Uploaded Downloads Labels
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h3f1888f_1.tar.bz2  9 months and 8 days ago 50 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_1.tar.bz2  9 months and 8 days ago 146 main
conda 4.6 MB | linux-aarch64/r-sigminer-2.3.1-r43hb19973c_1.tar.bz2  9 months and 8 days ago 47 main
conda 4.6 MB | osx-64/r-sigminer-2.3.1-r43h71b3455_0.tar.bz2  10 months and 16 days ago 609 main
conda 4.6 MB | linux-64/r-sigminer-2.3.1-r43h21a89ab_0.tar.bz2  10 months and 16 days ago 75 main
conda 4.2 MB | osx-64/r-sigminer-2.3.0-r43h71b3455_0.tar.bz2  1 year and 3 months ago 930 main
conda 4.2 MB | linux-64/r-sigminer-2.3.0-r43h21a89ab_0.tar.bz2  1 year and 3 months ago 108 main
conda 4.7 MB | osx-64/r-sigminer-2.2.2-r43h71b3455_0.tar.bz2  1 year and 7 months ago 1168 main
conda 4.7 MB | linux-64/r-sigminer-2.2.2-r43h21a89ab_0.tar.bz2  1 year and 7 months ago 106 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r43h21a89ab_2.tar.bz2  1 year and 8 months ago 100 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r43h71b3455_2.tar.bz2  1 year and 8 months ago 1228 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h71b3455_1.tar.bz2  1 year and 10 months ago 128 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42h21a89ab_1.tar.bz2  1 year and 10 months ago 124 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h71b3455_2.tar.bz2  1 year and 10 months ago 1320 main
conda 5.0 MB | osx-64/r-sigminer-2.2.0-r42h63d8054_0.tar.bz2  1 year and 10 months ago 106 main
conda 5.0 MB | linux-64/r-sigminer-2.2.0-r42hecf12ef_0.tar.bz2  1 year and 10 months ago 142 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42h21a89ab_2.tar.bz2  1 year and 10 months ago 112 main
conda 3.0 MB | linux-64/r-sigminer-2.1.9-r42hecf12ef_1.tar.bz2  2 years and 4 months ago 150 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r42h63d8054_1.tar.bz2  2 years and 4 months ago 432 main
conda 3.0 MB | osx-64/r-sigminer-2.1.9-r41h63d8054_0.tar.bz2  2 years and 5 months ago 53 main
conda 3.1 MB | linux-64/r-sigminer-2.1.9-r41hecf12ef_0.tar.bz2  2 years and 5 months ago 146 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r42h63d8054_1.tar.bz2  2 years and 5 months ago 1730 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r42hecf12ef_1.tar.bz2  2 years and 5 months ago 142 main
conda 3.1 MB | osx-64/r-sigminer-2.1.8-r41h63d8054_0.tar.bz2  2 years and 5 months ago 78 main
conda 3.1 MB | linux-64/r-sigminer-2.1.8-r41hecf12ef_0.tar.bz2  2 years and 5 months ago 134 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_1.tar.bz2  2 years and 7 months ago 1816 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_1.tar.bz2  2 years and 7 months ago 161 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_1.tar.bz2  2 years and 7 months ago 1820 main
conda 3.4 MB | osx-64/r-sigminer-2.1.7-r41h4277420_0.tar.bz2  2 years and 7 months ago 61 main
conda 3.4 MB | linux-64/r-sigminer-2.1.7-r41hecf12ef_0.tar.bz2  2 years and 7 months ago 149 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_1.tar.bz2  2 years and 7 months ago 154 main
conda 3.4 MB | osx-64/r-sigminer-2.1.6-r41h4277420_0.tar.bz2  2 years and 8 months ago 77 main
conda 3.4 MB | linux-64/r-sigminer-2.1.6-r41hecf12ef_0.tar.bz2  2 years and 8 months ago 153 main
conda 3.4 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_1.tar.bz2  2 years and 8 months ago 165 main
conda 3.4 MB | osx-64/r-sigminer-2.1.5-r41h4277420_0.tar.bz2  2 years and 9 months ago 1907 main
conda 3.3 MB | linux-64/r-sigminer-2.1.5-r41hecf12ef_0.tar.bz2  2 years and 9 months ago 159 main
conda 2.9 MB | osx-64/r-sigminer-2.1.4-r41h4277420_0.tar.bz2  2 years and 11 months ago 2035 main
conda 2.9 MB | linux-64/r-sigminer-2.1.4-r41hecf12ef_0.tar.bz2  2 years and 11 months ago 171 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_1.tar.bz2  3 years and 28 days ago 2134 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_1.tar.bz2  3 years and 28 days ago 169 main
conda 4.9 MB | linux-64/r-sigminer-2.1.3-r41hecf12ef_0.tar.bz2  3 years and 29 days ago 168 main
conda 4.9 MB | osx-64/r-sigminer-2.1.3-r41h4277420_0.tar.bz2  3 years and 29 days ago 49 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41h4277420_1.tar.bz2  3 years and 1 month ago 58 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41hecf12ef_1.tar.bz2  3 years and 1 month ago 175 main
conda 4.9 MB | osx-64/r-sigminer-2.1.2-r41hdb58930_0.tar.bz2  3 years and 3 months ago 2286 main
conda 4.9 MB | linux-64/r-sigminer-2.1.2-r41h52a8340_0.tar.bz2  3 years and 3 months ago 168 main
conda 3.2 MB | osx-64/r-sigminer-2.1.1-r41hdb58930_0.tar.bz2  3 years and 5 months ago 2394 main
conda 3.2 MB | linux-64/r-sigminer-2.1.1-r41h52a8340_0.tar.bz2  3 years and 5 months ago 195 main
conda 4.9 MB | osx-64/r-sigminer-2.1.0-r41hdb58930_0.tar.bz2  3 years and 6 months ago 2461 main
conda 4.9 MB | linux-64/r-sigminer-2.1.0-r41h52a8340_0.tar.bz2  3 years and 6 months ago 197 main
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