A rendering package for creating phylogenetic trees from SACCHARIS .json and .tree files, in the R statistical computing language.
This package will use metadata .json and .tree files output from SACCHARIS v2 to generate annotated phylogenetic tree PDF files. Highly customizable, as the formatting of the tree is done using ggplot2. Of course plotting functions can easily be manipulated as desired. To use, call Aloaddata() and Bplotsall() and follow prompts. Our default plots used for publication are domainECnonumeric.
