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Implementation of the classifier described in the paper 'Genome-driven integrated classification of breast cancer validated in over 7,500 samples' (Ali HR et al., Genome Biology 2014). It uses copy number and/or expression form breast cancer data, trains a pamr classifier (Tibshirani et al.) with the features available and predicts the iC10 group.

Type Size Name Uploaded Downloads Labels
conda 98.4 kB | noarch/r-ic10-1.5-r43h3121a25_6.tar.bz2  1 year and 4 months ago 1061 main
conda 97.7 kB | noarch/r-ic10-1.5-r42h3121a25_5.tar.bz2  2 years and 10 days ago 610 main
conda 96.3 kB | noarch/r-ic10-1.5-r41h3121a25_4.tar.bz2  3 years and 5 months ago 1180 main
conda 96.1 kB | noarch/r-ic10-1.5-r40h3121a25_3.tar.bz2  3 years and 7 months ago 176 main
conda 96.0 kB | noarch/r-ic10-1.5-r40h6115d3f_2.tar.bz2  4 years and 6 months ago 205 main
conda 96.0 kB | noarch/r-ic10-1.5-r40h6115d3f_1.tar.bz2  4 years and 6 months ago 199 main
conda 95.4 kB | noarch/r-ic10-1.5-r36h6115d3f_0.tar.bz2  5 years and 2 months ago 265 main

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