About Anaconda Help Download Anaconda

The focus of the dnet by Fang and Gough (2014) <doi:10.1186/s13073-014-0064-8> is to make sense of omics data (such as gene expression and mutations) from different angles including: integration with molecular networks, enrichments using ontologies, and relevance to gene evolutionary ages. Integration is achieved to identify a gene subnetwork from the whole gene network whose nodes/genes are labelled with informative data (such as the significant levels of differential expression or survival risks). To help make sense of identified gene networks, enrichment analysis is also supported using a wide variety of pre-compiled ontologies and phylostratific gene age information in major organisms including: human, mouse, rat, chicken, C.elegans, fruit fly, zebrafish and arabidopsis. Add-on functionalities are supports for calculating semantic similarity between ontology terms (and between genes) and for calculating network affinity based on random walk; both can be done via high-performance parallel computing.

Type Size Name Uploaded Downloads Labels
conda 1.7 MB | noarch/r-dnet-1.1.7-r43h3342da4_5.tar.bz2  1 year and 4 months ago 1142 main
conda 1.7 MB | noarch/r-dnet-1.1.7-r42h3342da4_4.tar.bz2  2 years and 1 month ago 799 main
conda 1.6 MB | noarch/r-dnet-1.1.7-r41h3342da4_3.tar.bz2  3 years and 6 months ago 1032 main
conda 1.6 MB | noarch/r-dnet-1.1.7-r40h3342da4_2.tar.bz2  3 years and 8 months ago 350 main
conda 1.6 MB | noarch/r-dnet-1.1.7-r40h6115d3f_1.tar.bz2  4 years and 6 months ago 261 main
conda 1.7 MB | noarch/r-dnet-1.1.7-r36h6115d3f_0.tar.bz2  4 years and 9 months ago 264 main
conda 3.0 MB | noarch/r-dnet-1.1.6-r36h6115d3f_0.tar.bz2  4 years and 10 months ago 2430 main
conda 3.0 MB | noarch/r-dnet-1.1.5-r36h6115d3f_0.tar.bz2  5 years and 1 month ago 2468 main
conda 3.0 MB | noarch/r-dnet-1.1.4-r36h6115d3f_1.tar.bz2  5 years and 4 months ago 2475 main
conda 3.0 MB | noarch/r-dnet-1.1.4-r351h6115d3f_0.tar.bz2  5 years and 11 months ago 354 main gcc7

© 2024 Anaconda, Inc. All Rights Reserved. (v4.0.6) Legal | Privacy Policy