bioconda / packages / r-bisquerna 1.0.5

Provides tools to accurately estimate cell type abundances from heterogeneous bulk expression.


conda install

  • noarch  v1.0.5
To install this package with conda run:
conda install -c bioconda r-bisquerna


A reference-based method utilizes single-cell information to generate a signature matrix and transformation of bulk expression for accurate regression based estimates. A marker-based method utilizes known cell-specific marker genes to measure relative abundances across samples. For more details, see Jew and Alvarez et al (2019) .

© 2022 Anaconda, Inc. All Rights Reserved. (v2.36.1 5a38adad) Legal | Privacy Policy