pretextgraph
Embeds bedgraph data into Pretext contact maps.
Embeds bedgraph data into Pretext contact maps.
To install this package, run one of the following:
This is a tool for converting data from a bedgraph format and embedding into a Hi-C contact map in the Pretext format. The graph data can then be displayed alongside the contact map using the PretextView desktop software (https://github.com/wtsi-hpag/PretextView). See https://github.com/wtsi-hpag/PretextMap for how to generate Pretext contact maps, or search for pretextmap on bioconda.
Summary
Embeds bedgraph data into Pretext contact maps.
Last Updated
Apr 4, 2025 at 13:24
License
MIT
Total Downloads
18.0K
Supported Platforms